EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00074

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:2370780-2372290

Target genes

Number: 10
Name	Ensembl ID

GNB1	ENSG00000078369
PRKCZ	ENSG00000067606
RP11	ENSG00000182873
C1orf86	ENSG00000162585
SKI	ENSG00000157933
RP4	ENSG00000238240
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_05387	chr1:2371716-2375156	Brain_Cingulate_Gyrus
SE_06162	chr1:2371984-2375169	Brain_Hippocampus_Middle
SE_33574	chr1:2367758-2371939	H2171

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002436

chr1

2367759

2375169

Enhancer Sequence

CCCCAGTGCT GGCCAGACCT GGTCCCCGAC CCCAGGGCTG CCCCCGGGTT CTGGGCCCTG 60
TTCATGGGAA GCCAAGCCAG GGGCAGCTGA TCCCATCCCA CCCGTTCGTT GTCTTGAGTT 120
CTGATTGAGA ACGGGACGTC TTCAGACCAG ATGCTGGTGG AAAATGAAAC ACACACTTTC 180
TAAATTTAGC TGCTGAGGAT TGCACGTTTA CCCGATTAAG CCCATTGATT GAGTTGCGTG 240
CACGTGCTCT CTCTGCAGTG CTCAGCTGTG CCTCTCCGGG CTGTCTGTCC TCCATGGTGA 300
CCTCAGGCTG CAGAAGGGCC TCTGAGACCT CCCGCCCAGG TCTCTGGCCC TGAGCCATCT 360
GTTCACCTGG GGCTGACACT GCCACCCTCG GGGGAGAGTC CCGGGGTCCG TGGGGAGAGC 420
CCGTCAGAGT CCAGCTGGAT TCTTCTCCAC TGAGGAAAGG CATTGCCTGA GAGACACCGC 480
AGCCAGGCCT GGCTGGAGTG TTCGAGGGCA GCGGGCACGC GGCTCCCTGC CTGCAGGGAC 540
CTCATGATCT TAATGTGAAG GGCAGACTCA AAATCAGGGC AAGGTCATGT CCGGGACACT 600
GCGGGGGACA AGGCAACCAG GGAGGCTTCC CAGAGGAGGT GCCTCGTTCC TGACCTTGGA 660
AACCAGGCAG GGGTGGGCAG GGGGCCTGTG GAGAAGGGGG AGTCAGGCTT GGTGGAGTGT 720
CTATGAGGGA AGGGCAAACA GGGTAGAGAA GGCAGCTGCA GCCAGTCCAC AGGGCCCTGG 780
GTGCCAGGCT GAGGGGTCCG ATGTAGCCTG TGGTCCAGCT GCAGGGGTGG GTGTATTGGA 840
GTGAGGCCTG CAGGCCAGAT GGGGTCTGTG GGTATGGCCC AGGAAGTGGC CCATCTGGGA 900
GCGCCCGGGA AGGAAGACTG GCTGGGAGGG CTGGAGCTGG GGAGGATCTC GGGTGGGGGG 960
CAGGCGGTGT GCCCTGGCTG CCGGGGTTGC CCCCAGGAGC ACCCGGCCAT GGTGGTGGGT 1020
GCCTCCACAC AGTCTGCCGT GAGAGGAGGC CTCTCTCCAT GTCTGTCGCT GGCCTTGCCC 1080
GGCCCGCCCG GGGATCTTGC ATTGCTGCGA CCAGGGATCC TCTCTCCATG TCTGTCGCTG 1140
GCCTTGCCCG GCCCGCCCGG GGATCTTGCA TTGCTGCGAC CAGGGATCCT CTCTCCATGT 1200
CTGTCGCTGG CCTTGCCTGG CCCGCCCGGG GATCTTGCAT TGCTGCGACC AGTGATCCTC 1260
TCTCCATGTC TGTCGCTGGC CTTGCCCGGC CCGCCAGGGG ATCTTGCATG CTGCGACCAG 1320
GGATCCTCTC TCCATGTCTG TCGCTGGCCT TGGCCGGCCT GCCCGGGGAT CTTGCATGCT 1380
GCGACCAGGG ATTCTTGAGC CTCTGGCTCA GGATGGAGAT TTCTTTCACA GTTTCCAATT 1440
TGCGTTTCGG TTTTGGCTTC GTGCAGGAGG CCAGGTTTCT GTCTCATTGC TGTTGGTGTC 1500
ATCTCTCTGC 1510