Tag | Content |
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EnhancerAtlas ID | HS128-13668 |
Organism | Homo sapiens |
Tissue/cell | MCF-7 |
Coordinate | chr20:43672560-43673410 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr5a2 | MA0505.1 | chr20:43673078-43673093 | GAGTTCAAGGCCAGT | + | 7.4 | SOX10 | MA0442.2 | chr20:43672649-43672660 | AAAACAAAGGA | + | 6.32 | Sox3 | MA0514.1 | chr20:43672649-43672659 | AAAACAAAGG | - | 6.02 |
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| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_10962 | chr20:43662638-43674701 | CD20 | SE_18305 | chr20:43666966-43673458 | CD4p_CD25-_Il17-_PMAstim_Th | SE_55665 | chr20:43672053-43674560 | u87 | SE_64816 | chr20:43672227-43674459 | NHEK | SE_67834 | chr20:43672053-43674560 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I045043 | chr20 | 43672341 | 43673549 |
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Enhancer Sequence | CAGTGATTTG CCATTGCCTT CTGTTATAAA ATCAGAGATA CATTCCCAAA GAATACTTGC 60 TCCCAGAGGG ACTGATCTAA AACTACTCTA AAACAAAGGA ATTAAAACTA TTACTGCTTG 120 GAAATTGATT ACCAAAGTGA TCATAGGTAT CAATTTTAGA ACTTCCTAAT GCTTTCTTCC 180 TTTCTTTTCC TTACATCTCT ATACAATAAT ACAGTGTTTC TTTCTACCCA CCTCTCAAAT 240 CATGAACTGT TGAGGTTAAC GGAAATTTTC AAATCTTGAA GCTCTGAAAC TACTTCCCTT 300 ACAGTAACAC ACTTCTACCA ATAGATGCCG CCCTTTCACT TCTTGAGTGC ACAATCTCCT 360 GTGTGGCATT TGCTTAAGGC AGAGCTTGCT GGCTATGTAA AATGAATGAT AAAATTATTG 420 AACCAGGCCG GGTGAATGAT AAAATTACCG AACCAGTGGC TCATGCCTAT AATCCCAGCT 480 TTTTGGGAGG CTGAGGTTGC AGGATCGCTT GAGCCCAGGA GTTCAAGGCC AGTCTGGGCA 540 ACATAGTGAG ACCCCATCTC TACAAAAAAT AAAAGCACAT TTTAAAAAGC CAGGTAGGGT 600 GGCATGTGCC TGTGGTCCCA GCTACTCAGG TGGTTGAGGT GGGAGGCTTG CTTGAACCCG 660 GGAGTATATG GTTTGCAGTG AGCCGTGATT GTGCCACTAC ACTCCAGTCT GGGCAACAGA 720 GCAAGATCGT GTCTCAAAAA AAAGAAAAAA GTTACTGAAT CACTTTAGAA ATTTGACATT 780 GTGTGAAGTG AGTTTGTTTG AAAATAGGGA AAACTTGTAA CACAGACCAG TAGAATGAAC 840 ATTACATTAC 850
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