Tag | Content |
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EnhancerAtlas ID | HS128-10819 |
Organism | Homo sapiens |
Tissue/cell | MCF-7 |
Coordinate | chr19:19600840-19601570 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:19601362-19601381 | CAGTGCCACCTAGAGGACG | - | 6.49 | Nr2f6(var.2) | MA0728.1 | chr19:19601474-19601489 | GAGGTCAGGAGTTCA | + | 6.22 | Zfx | MA0146.2 | chr19:19601450-19601464 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_01191 | chr19:19597419-19601481 | Adrenal_Gland | SE_09215 | chr19:19595450-19601494 | CD14 | SE_11973 | chr19:19597794-19601624 | CD3 | SE_13867 | chr19:19597292-19601474 | CD34_Primary_RO01536 | SE_14578 | chr19:19595555-19601818 | CD4_Memory_Primary_7pool | SE_17284 | chr19:19597785-19601599 | CD4p_CD225int_CD127p_Tmem | SE_17695 | chr19:19595455-19601775 | CD4p_CD25-_CD45RAp_Naive | SE_18023 | chr19:19597051-19602095 | CD4p_CD25-_CD45ROp_Memory | SE_18475 | chr19:19595670-19601884 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19438 | chr19:19598715-19601649 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20088 | chr19:19597646-19601744 | CD56 | SE_22348 | chr19:19595603-19601745 | CD8_primiary | SE_24291 | chr19:19597429-19601354 | Colon_Crypt_2 | SE_29832 | chr19:19598800-19601612 | Fetal_Muscle | SE_31176 | chr19:19598232-19601563 | Fetal_Thymus | SE_32371 | chr19:19599909-19601478 | Gastric | SE_37262 | chr19:19598596-19601447 | HSMMtube | SE_41770 | chr19:19599953-19601445 | LNCaP | SE_42846 | chr19:19598281-19601556 | Lung | SE_50636 | chr19:19598249-19601453 | Sigmoid_Colon | SE_53638 | chr19:19595818-19601579 | Spleen | SE_55298 | chr19:19598271-19601370 | Thymus | SE_69075 | chr19:19598313-19601571 | H9 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I019484 | chr19 | 19595616 | 19601954 |
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Enhancer Sequence | GCTAAGACCT GAGTGAGGTG TCCTGGGTTA CTTTAGAAAC AAACTACCCG GTTCTGGGCT 60 TCAGAATGTG GGCTGATAAC CCCTTGCCTG GGGGATTGTA TACTTCGAAA TCGTACCTTT 120 CTGTCCACGC CCAGGTCTCT GGTGAGAAGC TGCTTCATCA GGGCTAGGAC CAGCGTTCAG 180 GTACAGCCAC CACGTAGCTG TGGTGGGTGG AATTAGGAGG GACCAGAGGA GAGCAAGTAA 240 AGCGGTTCCT GAGTCCAGCA TCTGGCGAGT CCAGGGTAGC ATTGGTGAAG CCTTAACCTC 300 TGGTGCTCTG TGTCTACCCT TCCCTGAGGA CGCAGCTCAT GGGTGTGGAG GGGACCTCAG 360 AGGTCCCGAG GGCTGCTAGA GCAGAGTCAG GTTCTTCATC CTAGCGACTC TCCTCAACCC 420 TGCCGGGGTC TAATTATCAA CTAGACCCTG GCACAGCAAG AGCCAGGACA ACTTTGAGCT 480 GCGGCAACCA GTTAACTTTG TCCGAGTTTG TTCTCTGGGT CACAGTGCCA CCTAGAGGAC 540 GTGTCTGTCC TTGGCTGGTT TTCCTGCTGA CAAAAAAAAT GGACTTGATT CACTTCGATG 600 AATGTACAAT GAGGCCGAGG CGGGCGGATC ATCTGAGGTC AGGAGTTCAA GACCACCCTG 660 GCCAGCATGG TGAAACCCTG TCTGTACAAA AATACAAAAA AAAAATTAGC CCGGCATGAT 720 GGTGCATGCC 730
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