Tag | Content |
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EnhancerAtlas ID | HS128-10458 |
Organism | Homo sapiens |
Tissue/cell | MCF-7 |
Coordinate | chr19:1854990-1855960 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:1855390-1855408 | GGAAGACAGGCAGGAAAG | + | 6.43 | KLF5 | MA0599.1 | chr19:1855444-1855454 | GGGGCGGGGC | - | 6.02 | SP1 | MA0079.4 | chr19:1855422-1855437 | AGGGGGCGGGGTCTC | - | 6.27 | SP4 | MA0685.1 | chr19:1855420-1855437 | GGAGGGGGCGGGGTCTC | - | 6.4 |
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| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_05653 | chr19:1854545-1857986 | Brain_Cingulate_Gyrus | SE_12493 | chr19:1855142-1855377 | CD34_adult | SE_12493 | chr19:1855582-1855832 | CD34_adult | SE_12794 | chr19:1855785-1856406 | CD34_fetal | SE_15325 | chr19:1851179-1863643 | CD4_Memory_Primary_7pool | SE_17066 | chr19:1855162-1858408 | CD4p_CD225int_CD127p_Tmem | SE_18006 | chr19:1854567-1858438 | CD4p_CD25-_CD45ROp_Memory | SE_20207 | chr19:1854775-1857036 | CD56 | SE_20804 | chr19:1851994-1859364 | CD8_Memory_7pool | SE_22514 | chr19:1854652-1858255 | CD8_primiary | SE_23274 | chr19:1855536-1863748 | Colon_Crypt_1 | SE_23831 | chr19:1855456-1863700 | Colon_Crypt_2 | SE_24756 | chr19:1851482-1865735 | Colon_Crypt_3 | SE_27152 | chr19:1853176-1865991 | Esophagus | SE_34338 | chr19:1852133-1866086 | HCT-116 | SE_41602 | chr19:1854125-1856964 | LNCaP | SE_45211 | chr19:1855501-1858228 | NHLF | SE_50407 | chr19:1852750-1865843 | Sigmoid_Colon | SE_52963 | chr19:1854521-1862878 | Small_Intestine | SE_53592 | chr19:1853107-1866012 | Spleen | SE_57652 | chr19:1855522-1856323 | VACO_503 | SE_61842 | chr19:1851542-1865663 | Toledo | SE_68584 | chr19:1847293-1885536 | TC71 | SE_68585 | chr19:1847293-1885536 | TC71 | SE_68586 | chr19:1847293-1885536 | TC71 | SE_68587 | chr19:1847293-1885536 | TC71 | SE_69023 | chr19:1852746-1858528 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | AGAAAGGACT CTCCGGCGAG CCCAGAATCT GTTAACCGTA AGTAACCGCC GCAGACCCCC 60 AAGGCTGAAG CTCCCCAGGC CCTCGCAGCC TCTGGCCCCA GGCGGGACCC TGGCAGGGAT 120 TAGCAAAGGC CTCCCAGTGT CTGTCCCAGG CACAGGCACG CTCAGAAGGC ATGCTCGGCC 180 TTCAGGCTGT CCCTGCCCCC CACCCAGGGG CATGCAGGGG CCTCCATCTG TGCATGATCC 240 CCTCCTTTTC CAAATGACCA CCTGGGATGC AAAGGCTGGG TTAAGGGGGT ACAATCATGG 300 CAACCTCCCT AACCCTCCTG GCCCCTCCAC GAGCAAGGGG GCATGGGAGG AACCCGCAGG 360 CACAGTCAGT CTGGGCCCCG ATCTCGGGGT GTGGTTAGAT GGAAGACAGG CAGGAAAGCT 420 CACAGGGAGG GGAGGGGGCG GGGTCTCCCG GGAAGGGGCG GGGCCCGGCG GGCTGGACTC 480 GCCCCACCCC CACGGGACAG ATGGCGCTGG GCAGGGGCGG GCCACCACCC GGCCACTTCC 540 TCCACAGTCC CCTCCCACCG CCAAGGCCGG GCCTCGCCCA TCCTGCCCCT AACCAGCCGT 600 CACCATCTGG GCCTGCCTGT GCGCCTCCAG GCGGTGTGGG TCTTTGCTCT AGAACTGTGC 660 CACCCGACCC CTTCCTTTAG CCGGGGTCTC ACGCCCACAG CATGTGGCAT CGTGATGTCA 720 GCGTCTCCCC AGCAGATAGG GGTCTCCAAC GACTGGGGAG GGGCAGGTCA GTCCACCTCC 780 ACCCAGGGAC CGAAGCAGGA CAAAGGGCCC TGCATCCCCG AAGCTCCCAC CCTTTCGGGC 840 CCTGCACCAG GTACCCTGGA CCCTGGCATT CCGGGACGTT ATTCCCGTGA CACCCCAGGG 900 TGGGTTGTGT GGATGGAGAC CGGATGTGCA TGCCCCTCGT GGCACTGGTT GGAGCCCTGA 960 GTAGCAAAAG 970
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