EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS128-01776

Organism

Homo sapiens

Tissue/cell

MCF-7

Coordinate

chr1:204376250-204378610

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263

MA0528.1

chr1:204378445-204378466

GGGTGAGGGACAGGAGGAGAA

6.1

dbSUPER

Number of super-enhancer constituents: 28
ID	Coordinate	Tissue/cell

SE_00064	chr1:204374155-204384372	Adipose_Nuclei
SE_07775	chr1:204376171-204381746	Brain_Inferior_Temporal_Lobe
SE_12242	chr1:204377042-204381849	CD3
SE_13020	chr1:204376800-204382840	CD34_Primary_RO01480
SE_13620	chr1:204375885-204382713	CD34_Primary_RO01536
SE_14222	chr1:204375835-204382864	CD34_Primary_RO01549
SE_14854	chr1:204375518-204382193	CD4_Memory_Primary_7pool
SE_17095	chr1:204375880-204381997	CD4p_CD225int_CD127p_Tmem
SE_17602	chr1:204373560-204382940	CD4p_CD25-_CD45RAp_Naive
SE_18046	chr1:204373673-204382999	CD4p_CD25-_CD45ROp_Memory
SE_18998	chr1:204372440-204382154	CD4p_CD25-_Il17-_PMAstim_Th
SE_19722	chr1:204375797-204381837	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20531	chr1:204377073-204378050	CD56
SE_20531	chr1:204378096-204381867	CD56
SE_21070	chr1:204375678-204382207	CD8_Memory_7pool
SE_21890	chr1:204376513-204381870	CD8_Naive_7pool
SE_22694	chr1:204375889-204382158	CD8_primiary
SE_23499	chr1:204377184-204377830	Colon_Crypt_1
SE_23499	chr1:204378194-204381086	Colon_Crypt_1
SE_26359	chr1:204376035-204383017	Duodenum_Smooth_Muscle
SE_28866	chr1:204378208-204381807	Fetal_Intestine_Large
SE_30374	chr1:204378166-204381865	Fetal_Muscle
SE_34711	chr1:204376816-204384293	HeLa
SE_36671	chr1:204376037-204381866	HMEC
SE_40776	chr1:204378176-204381817	Left_Ventricle
SE_42225	chr1:204378358-204381840	Lung
SE_45371	chr1:204378023-204381984	NHLF
SE_64411	chr1:204375728-204381833	NHEK

Enhancer Sequence

ATTTTTGCTT ACTTCTATTC TTTTTCCTTT TAAAAATTTT TTTCACTTTC CAACTTTTAA 60
ATCAACATGT TGTACTATTT TTGTATCATT ACTTTGGCAA TAACAATACA GAAGAGAAAA 120
AGTTACTTAG TAAACAAAGT ATAGCAAAAT TAGTATTTTT AAAGCTGTGT TACTCTAAGA 180
AACTTTGTAG TTAAGATTTT AAAAACCTTT GTATTCAATA TGCTATCACT ATATATGAAA 240
TTGTGATTCT AATATACATA ATGACATGTA ATGAGTGACA ATCCCTACTC ATTACTAATC 300
ACTACTTAAT TTCTAATGAA GTTTCTTTCT AAGATATCAA ACTCCAAAAG TAAATACTTG 360
CTTTCAAGTA TGTTTAATAG TTACATCAGC TAACCCCAAT GTGGCCTACT ACTTTCGTTC 420
CCTTTACATC AAGCCAAGGG ATGCCCCTGA GGACAATTAG CAGGTATGTA ACACCTTACT 480
AGTTATTGCA TTCTAGTCTT GAATACTACT CATTCATTGT GTCATTAAGA TAAATAATAA 540
AAACGTACAG TGTTTACCAT ATACCAGGCT TTTTTTAAAG AGCTTTACAT TTTTATCTCA 600
TCTAATCCTC ACATTAACCC TATGAGGTAT GGACTATTAT CATCCCCATT ATACCGATAA 660
GAAAACAGAG GTAGAAGGGT TTTTTAGACT CACTGTCCAT CATCCTATAT ACTCCATATA 720
TTCCATACAC CATTCCCCAT ATATACCAAT GGCAGGTAGT CAAAGGCTGT CAAATAATTA 780
TATCATATTC AGACATAATC ATTTATAAAT TCTGCTTCTA GTTCATAGTC AATAGTATCA 840
TCTACTCCAC TCATTTCATT TTACTCAACG AGCAAGCTAA AACAAGACAT GAGACTGGCC 900
TGAGGTCTCT CAATAAGAGC TAGCATTTAA AGGCAAGGCA ATAAATTCTG AGTTTTATTT 960
ACTTGTCTCA TTTAAATCTT GCAATAACTT GTACAATAGA TATTATTATT TTACCCATCA 1020
AGTAAGAGTG AATTGAGGCC ATGAGAGTCA AGCAACTTCC CAGGTCTGGC TGCCTTCCAA 1080
ATCTCTGCGC CTTAACCACT GAGGAGTAGA GAACACAGGG CTCCAGCTGC CAAGTGCTCA 1140
TTCCATTGCC CCACTTTGTT TCTTACCTAT TCATTCTAAA TAGGTCATTT TGTCAGGGGC 1200
CCCTTAAAAG GACAAAGAGA GATGGCATTT ACAAAGTGTG AACTAAAATT TAATCTTTAA 1260
CATGACTTAT TCTGCCCTAA AGGTAAGACG TAAGATTATC ACCATTTTGA GACATTTTCT 1320
ACCCAGGAAT AATTTCAAAG TAGTAAGCTG GCCATGTGGA GCCAAGAGAT TATGGTACTG 1380
TCCATTTGAA ACGCCCCAGT GAGGCAGAAT CTGAGGTCAA TAATAACTCA CCCACTAACT 1440
TCTCTCTCCA AGTAACGGTA TAGAAAACTA AAAAAACGTT CCCTCTACAA TAATAGACAC 1500
CTTTGAGTTT GGAGAAGAGT TCAATTAATA ACTTTAGTTG AATCAACTAT AAAGAAAAAC 1560
AAACCAACTC TAAAGACTCC CAAAATAAGG TTAACCTGAC AATGTAATTA AAGCGTAAAA 1620
TGCTGCATGA AGTTTTAAGA CTAGCCTGGG AAAAGGAAGC AACTAGTCAA GATAAACCAA 1680
GTAAGTGGCC ATCACTGTTT ATTATTAATA TTAACCTGTA GCTGACCACT GATAACTAGC 1740
ATTGCATTCC TAAGAAAAGG CAATACCACT TCCTGTACTG GCTTTGACTT TCAATTAAAA 1800
CCATGTAATG TCAAAACCAG TGAAATTACT ATTTAATTTC ATGGCCAATT GGACCAGATA 1860
AATCTGACTT GCTACTTGAT ATCATCATCC CTTTGGGTTG TAATGGACAG GAATGAAGAC 1920
ACTCTTGTTA TATGCAAAAA AAATATTAAG TATTTGCAGA CAACATACAT TTAAAATCAT 1980
TTTAAAACTC TATGGCTGTA ACAGGACCTT TTCAATCTCT AGAAAAATTA AATCGTGTAC 2040
ACACAAAGTT TAATAGTCCG TTAAAAAGTG TGAAAAATTG AAGCTTGTAA GGAAACAGTC 2100
CAGAACTACC AACCCAAATA AAAATGGCAC TTTCCTGCTA ACATCTACAC ACTGGTATGT 2160
TCGTTTTGGA CAGCAACAAT GTGCATTGGG GTGGGGGGTG AGGGACAGGA GGAGAAGGGT 2220
CATTTACATA TTTCTCAATC CAAGTATATG AATTTAGAGG CCTTCCTCAA AAATACATGC 2280
ACTCCTAAGC CTCCAAAGTC ATGCTGCTAT ATTTAAGCAT ATAAAAACAG TCAGAACATA 2340
TCAGGCATGT TAAAAGACAA 2360