EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS128-01286

Organism

Homo sapiens

Tissue/cell

MCF-7

Coordinate

chr1:155728120-155730070

Target genes

Number: 9
Name	Ensembl ID

DAP3	ENSG00000132676
ARHGEF2	ENSG00000116584
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
RAB25	ENSG00000132698
LMNA	ENSG00000160789
SLC25A44	ENSG00000160785
RP11	ENSG00000260238
PMF1	ENSG00000160783

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HOXA13	MA0650.2	chr1:155729480-155729491	CCCAATAAAAC	+	6.62
NKX2-5	MA0063.2	chr1:155728883-155728893	CTCAAGTGGT	-	6.02
Nr2f6(var.2)	MA0728.1	chr1:155728453-155728468	GAGGTCAAGAGTTCG	+	6.24

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I155760

chr1

155729957

155730993

Enhancer Sequence

ATACTTTAGA GTTTATATTA CAAAGAACTT TCAGGCTGCA CAAGGTGGCT CATAGCTGTA 60
ATCCCATGTT GGGAGGCCAA GGCAGGAGGA TCGCTTAAGG CCAGGAGTTC AAGAACAGCA 120
ACATACTGAG ACTATGTCTC TACAAAAAAA TTTAAAAATT AGGCAGGGGC CGTGGTGTAC 180
ACCTGTAGCT TGAGCTACTT GGGAGGCTGA GGCAGGAGGA TCCCAGGGGC CTGTGTTGTC 240
CAGGCTCATC TCAAACTCCT GTCTACAGGC CAGCTGTGGT GGCTGATGCC TGTAATCCCA 300
GCACTTCGGG AAGCCGAGGT AGGCAAATCA CCTGAGGTCA AGAGTTCGAG ACCAGCCTGA 360
CCAACATGGT GAAACCCCAT CTCTACTAAA AATACATAAA TTAGATAGGT GCGGTCATGC 420
ATGCCTGTAA TCCCTGCTAC CCGGAAGGCT GAGGCAGGAG AATCACTTGA ACCTGGGAGG 480
CAGAGGTTGC AGTAAGCAGA GATCACACCA CTGCACTCCA GCCTGGGTGA CAGAGTCAGA 540
CTTTGCCTCA AAAAACAACA ACAATAAAAC AACAACAACA AAACTCCTGG CTACAAGGGA 600
TCCTCCCACC TTAGCCTCCC AAAGTGCTGG GATTACAGAT GCCAGCCACT GTGTCTGGCC 660
ATTGTCTCTC TCTTTTTTGT TTTTGAGACA AGGTCTTGCT CTTGTCACCC AAACTGGAGT 720
GTAGTGGAGC AATCATGGCT GAGTGAAGCC TCAACCTCTC AGGCTCAAGT GGTCCTCCCA 780
CCTCAGCCAC CCAAATAGCT GGGACCAAAG GTGTGCACCA CCACACCCAG TTAGTTAATT 840
TTTTTATTTT ATGTAAAGAT GGGGTCTTGC TATGTTGTCC AGGCTGGCCT CCCAAAGTGC 900
TGGGATAACA GGTGTGAGCC ACCATACCTG GCTGACATTA TCTCTTTAAA AAAATTTTTT 960
GGCCAAGTGT GGTGGCTCAC ACCTGTAATC CCAGCAATTT GGGAGGTCGA GGTGGGCAGA 1020
TCACCTGAGG TCTGGAGTTC GAGACCAGCC TGACCAACAT GGAGAAACCC CGTCTTTACT 1080
AAAAATACAA AATTAGCCAG GCGTGGTGGT GGCGCATGCC TGTAATCCCG GCTACTCGGG 1140
AGGCTGAGGC AGGAAAATCG CTTGAACCCA GGAGGCGGAG GTTGCAGTGA GCCGAGATCA 1200
CGCCACTGCA CTCCAGCCTG GGCAACAAGA GTGAAACTCC ATCTCAAAAA AAAAAAAATT 1260
TTTTTTTTTG TTCACGTATA CACTGATTGG AACCTCATAA TACCAGAAGA GAAAATGGGC 1320
ATCACACATT ATATGCAGAA CTACCCCACT GTCATTTAAC CCCAATAAAA CTCTTAGAAT 1380
AATCCCGTTC CTCCCTTTGT TCCTATTTTT ATGACGATAA GTCCAGGACT ACTGGGATAT 1440
CCCTCATGTT TAGCCTCCTA TTCTGCAACA TTTCACGTTA CCATACCACA GTGGCCTTCC 1500
CAGACCGCTG TGTATAAAAC CACCCCTCTA GTTTCCTTTC CTGCTTTATT TTTCTGTAAA 1560
ACATGATCAC TATAAAACAT TGTATACTAT ATATTTTGCT GTTTATATTT ATTTTTATAA 1620
TTTATATTTT ATATATTATA TATATATATA TATGATATAT ATATATATAT GTTTTCTGGA 1680
GTATCATCTG AATTTCCTCA TGATAACGTA AGCTCCACGA GGGCAGGAAT TTTAGTCTTT 1740
TGTAATTACT ATATTCCTAG CAATTGAGGT CAGGAATTGC TAGGAATTCC TGACAGTTAG 1800
GAGGCACCTA ACAAATATTT GTTAAATGAA TGTCTGGCTT GATACCAGTG AGAAGCAGAG 1860
AGCATATGAC TCACCTAAGG TGTCCTTTGG CAACTATAGG TAAAACCCTC TCATTTATCA 1920
TGTAAAGAAA ATGGGAGAAT GGGATTGGAA 1950