EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS128-00385 
Organism
Homo sapiens 
Tissue/cell
MCF-7 
Coordinate
chr1:27829840-27832420 
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr1:27830565-27830583GGAACGAAAGCAGGAAGA+6.13
Nfe2l2MA0150.2chr1:27831966-27831981TGCTAAGTCATTGTT-6.36
Nr2f6(var.2)MA0728.1chr1:27830156-27830171CGATCTCTTGACCTC-6
STAT1MA0137.3chr1:27831609-27831620TTTCCCAGAAA-6.02
STAT3MA0144.2chr1:27831609-27831620TTTCCCAGAAA-6.32
ZNF263MA0528.1chr1:27831218-27831239TGAGAATGGGGAGGAGGGAGG+6.04
Number of super-enhancer constituents: 30             
IDCoordinateTissue/cell
SE_02913chr1:27830213-27831026Bladder
SE_02913chr1:27831120-27832355Bladder
SE_05196chr1:27829210-27833352Brain_Cingulate_Gyrus
SE_05814chr1:27829181-27832931Brain_Hippocampus_Middle
SE_06945chr1:27829261-27832857Brain_Hippocampus_Middle_150
SE_07770chr1:27829738-27832662Brain_Inferior_Temporal_Lobe
SE_23188chr1:27830280-27832092Colon_Crypt_1
SE_24033chr1:27830527-27830952Colon_Crypt_2
SE_24033chr1:27830969-27832275Colon_Crypt_2
SE_24711chr1:27830217-27832142Colon_Crypt_3
SE_25901chr1:27830171-27832637Duodenum_Smooth_Muscle
SE_26518chr1:27830129-27832742Esophagus
SE_27625chr1:27830080-27832462Fetal_Intestine
SE_28547chr1:27830055-27832555Fetal_Intestine_Large
SE_29557chr1:27829444-27832772Fetal_Muscle
SE_31394chr1:27830159-27832397Gastric
SE_33477chr1:27830354-27831735H2171
SE_34755chr1:27830079-27832086HeLa
SE_35950chr1:27830256-27832335HMEC
SE_36974chr1:27829579-27833069HSMMtube
SE_39896chr1:27830278-27832548K562
SE_40593chr1:27829483-27832634Left_Ventricle
SE_42106chr1:27830105-27832560Lung
SE_48058chr1:27830093-27832593Psoas_Muscle
SE_48567chr1:27830115-27832554Right_Atrium
SE_50130chr1:27830153-27832341Sigmoid_Colon
SE_51091chr1:27829612-27832640Skeletal_Muscle
SE_52467chr1:27830150-27832427Small_Intestine
SE_62718chr1:27801410-27856116Tonsil
SE_65253chr1:27830186-27832347Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr12783030427830805
chr12783080827832117
Number: 1             
IDChromosomeStartEnd
GH01I027502chr12782888927832715
Enhancer Sequence
GAGGATTGGA CTGGATTCTG GGGGTGCTGG GGAGGCATGG AAGAGTTCTA ACAGAGATAT 60
GTCACAATCA AATGTCCCTT TTGCAGGATC ACTCTGAATT TTTTTTTTTT TTTTTGAGAT 120
GGAGCCTGGC TCTGTTGTCC AGGCTGGAAT GCAGTGGCGC GATCTCGGCT CACTGCAGTC 180
TCCGCCTCCC GGGTTCAAGC AATTCTCCTG CCTCAGCCTT CCAAGTAGCT GGGACTACAG 240
GTGCGCACCA CCACGCCTGG CTAATTTTTG TATTTTTAGT AGAGACGCGG TTTCACCATG 300
TTGGCCAGGA TGATCTCGAT CTCTTGACCT CGTGATCTGC CTGCCTCGGC CTCTCAGAGT 360
GCTGGGATTA CAGGCGTGAG CCACCGCGCC CAGCTCACTC TGAATATTTT GAGCGACCTA 420
TTTATGATTT GAATTTATTC ATTCGAGAAG CACCCCAACA TACCTCCTAT ATGTCAGGCA 480
TGGACCCAGG AACTGTGACT ACAACAGATA ATTAGGGGTT GGTTCCTCAG ACAGGACAAA 540
GGGCAGGACA CTGAGTGCCA CCTCTACAGA GGGGTCTGAC TGGATAAAGA CAAAGTGTGA 600
AAGTGTATGA CTTTCACAAA ACAAGAAAGC CAAGCCCCGT GTGGGGTGAC AGGGTGCAGG 660
GATGGGAGAT GGCACTCAGG GAGCTAGCAC TGGACAGGCC AGTGATTCCG AAGACAGAGG 720
ATAAAGGAAC GAAAGCAGGA AGAGAGGGAA TGAGTTATGG GTGAAATATT CGGATCCTGT 780
AGCCTCCATA GAAGGTGGCC AAGTGGGCAG GGGGCAAAGT CCCAGCCAAG CCCCTCAGCA 840
CCCCCATGTG TTCCCAGCCC TGCTGAGCCC TGCAGCTCGT CTCCTCCTGG CTCCAAAAGT 900
CAGACCAAAC CCCGGAGAAC AGAGGCGGGT GAGGAGGGGG CGGTGGGGTA CAAGCCCAGG 960
CCTCTCACCC CAGCAAAGCC TGCCTTCCCA GTGCCTGGGG CCAACCCAGC TGAGAAGCCA 1020
GAGGTTACAG GGAAAGGATT AAGGAGTTGC TTGCTTTTTT ACCCAAACTC TGCTGTATTT 1080
CTCTGTCTTT CTTCAATCTC TCTCTCTCTC TCTTTTTTTT TAAAGAAAAA TATTCCTGTA 1140
CACGCACCCA GAGGCTTTTG CAGGAGGCGG CTGTTGGAGA ACTGGGAAAA CAAGCCAAGA 1200
AACAAGAGAG AGGAAAAAGA CCACGCCTCG CCTGGCAGAT TCCTAATGGC CCAGGAGACC 1260
TGAGGCTTTA CAGTGGGAGG CCGGTGGGGG CTGGCTCGGG TGGGAGGGAA GGGCAGGCCG 1320
AAGGACAGCC ACTTGCTGGC TGGTGACCTT GGGCGGGATA CTGCCTGCTT CCCTCTGGTG 1380
AGAATGGGGA GGAGGGAGGC AGGGGCAGGC CTGGCCGGCT GAGGTCACAG GAAGGCCCCT 1440
TCCAGCCTGA AACGCGATCT CGGGATGTGG GGCCTGCCAA CCTGCAGCGA CCCTGGGCCA 1500
GCAGAGATGA AAGGCTGCCT GTCCCCAGCT TCCGGACCCC CAAGGCCCCA CTGCCTCAAA 1560
GTTGGAGAGC AGCAGAGCTG TGTTGCCACT GGCTGGGGCC AGCTGCTGGG CTCCCCACCC 1620
CACCTTATGT CATCCAACCC TCCCTTCCCT GTTTTGCAGA GGACACTCAG GCCCAGAGAG 1680
GGTGGTGACC TGCCTGAGGT CACACAGCAA GCGGGAGTCT GAGCCAAGGC TCACCACAGT 1740
CTTTGGACTC CAAGTCCAGG CCTCCTGCCT TTCCCAGAAA CTTGGCTGCC TGGGGGCTTA 1800
CCCTGGGGAG TTGGAGAGAA CTAGGGCTGG GGAGGACACT TAGGAGCTGT GTCTGTTTGA 1860
AGTCACAACT TAATGTTGAC TAAAGTGCTT TTTTTTTAAA AGACAAAAAG AAAATTCCCA 1920
GCCCCTGCCA TAAGCCTGGA CTTGCTCACT GGCAGGGGAA GGAATGCAGC TCTGGCCACC 1980
ACAGCTGCTG GTGGCCAGCT GCAGCCTCAG CTTCTGCTGC TCCCGCCCCA GCCGGCAAAG 2040
GGACAAAGGC CTCTTCTCAG GCCTGTCCTC TCCAGCCCCC TGGATCAGCT GGCAGAACAT 2100
TGACGGAGCC TCCTCTGTCA CAGACCTGCT AAGTCATTGT TCCTCTCTGG GCCTTAGTGC 2160
CGTTTCTGTA AAATGGGGGC ATAGTATCTG CCTGACCTAC TTCTCAGCAC TGTTTTGAGG 2220
CTCCAAGTAA AGTTCTGGAA ATACAAAGCT CTCAGCGCCT CCTTCCACCT GCGGGTCTGC 2280
CTTCTCACTG TGCCCTTTGC CTCGACCACC CCTCCCTCCC TCATGCTTTC CCTGGCCAGC 2340
CCCAACTCAC TCAGCTCAGC TCAGTGGGAC CATCACCTGC TCTAAAACCT GCCCTCAACT 2400
TCTGAAGGAG GCACCTTCAG AAGAAAAAAG ACGGCAGTGC TGTATTTATC ATGGTTGTAC 2460
ATAATTAAAT AATTGGCCAG TGTGGTGCCT CAGGCCTGTA ATCCCAACAC TTTGGGAGGC 2520
TGAGGTGGGA GGATTACTTG AAGCCAGGTG TTCAAGACCA GCCTGGGCAA CATGGCAAAA 2580