Tag | Content |
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EnhancerAtlas ID | HS128-00259 |
Organism | Homo sapiens |
Tissue/cell | MCF-7 |
Coordinate | chr1:20820080-20820790 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:20820456-20820475 | TAGCGCCACCTGGAGGGCA | - | 6.75 | EWSR1-FLI1 | MA0149.1 | chr1:20820506-20820524 | GGAAGGAAGGAAATGAGG | + | 6.52 | ZNF263 | MA0528.1 | chr1:20820504-20820525 | GGGGAAGGAAGGAAATGAGGA | + | 6.27 |
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| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_03446 | chr1:20820046-20821017 | Brain_Angular_Gyrus | SE_05163 | chr1:20818197-20822011 | Brain_Cingulate_Gyrus | SE_06168 | chr1:20818768-20821372 | Brain_Hippocampus_Middle | SE_06941 | chr1:20819734-20820881 | Brain_Hippocampus_Middle_150 | SE_08044 | chr1:20818292-20821566 | Brain_Inferior_Temporal_Lobe | SE_23263 | chr1:20820527-20821683 | Colon_Crypt_1 | SE_36791 | chr1:20820204-20824789 | HMEC | SE_41848 | chr1:20820192-20821214 | LNCaP | SE_57678 | chr1:20820408-20821631 | VACO_503 | SE_65794 | chr1:20819750-20821572 | Pancreatic_islets |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I020493 | chr1 | 20819901 | 20824695 |
|
Enhancer Sequence | TTATGCATAT CTCGTTTTTG TTTAAAGAAA TTATGGTTAG TATATTTAAA GATGTGAATG 60 CCTGGGAAAT TACAGGGGAG AAATGTGGGA TTTTTGGTCC CCCCTGAATT TTCTGGGTTT 120 CTCAAAACTT TCACATCTGC AGCCAGCTCC CTAGTGAGTT GGGCCGACAA AGGAGGAAAT 180 TGAAGAGACT GCTTCGCCCT TTCCGGGCTG TTCCCAGCTG GCCCTGGGAT CAGGAGGCCA 240 GCGTCCTCCT CAGAGTCTGC TCTCTGACTT CCAAGGCCTG TTCCCCATCC CTTGGGGAAG 300 GGAAAATTGC ACAGGCCTTT GGAAGCACAA CCTGTTTGTC CTCCAAGTCC TCCAGCCCTC 360 CTCGACCATA GAGACATAGC GCCACCTGGA GGGCATTGTG GAGACTGCAG CATTAGGAGG 420 GGCTGGGGAA GGAAGGAAAT GAGGAAATGA AGATGAGCGA TTTGTTGCAA GCACGCGTGG 480 AGCACAGCCC AGTAACTAGG AATGCAGGAA GCACCTTTAA TAGCTAGGGA AGACGGTGAG 540 GGGATGGAGC CTGCAATTAT GGTCATCTGG ACATTAACAT TAGTACGACC TCGTTTGTAC 600 CCCCCTCCCA GGCCTAGGGA GCATTCGGGT TACAGATGCA AGGTGCCTGG CCCACTCAGC 660 GCTTAATAAA TGTTTGTTGA GTTCGGCTGT GGCCCCCCAG AGTCATGGCC 710
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