EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS128-00164 
Organism
Homo sapiens 
Tissue/cell
MCF-7 
Coordinate
chr1:12229470-12232600 
TF binding sites/motifs
Number: 5             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
GATA2MA0036.3chr1:12232427-12232438TTCTTATCTGT+6.14
Gata1MA0035.3chr1:12232427-12232438TTCTTATCTGT+6.62
Nr5a2MA0505.1chr1:12231941-12231956TCTGACCTTGACCTT-6.94
RORAMA0071.1chr1:12231949-12231959TGACCTTGAT-6.02
ZNF263MA0528.1chr1:12231491-12231512TCTCCTTCCCTCGCTTCCTTC-6.08
Number of super-enhancer constituents: 43             
IDCoordinateTissue/cell
SE_00369chr1:12226565-12247198Adipose_Nuclei
SE_01471chr1:12232095-12234188Adrenal_Gland
SE_04546chr1:12229673-12230905Brain_Anterior_Caudate
SE_06521chr1:12227066-12230957Brain_Hippocampus_Middle
SE_06521chr1:12231395-12234253Brain_Hippocampus_Middle
SE_09154chr1:12224797-12249846CD14
SE_10696chr1:12231624-12233979CD19_Primary
SE_11902chr1:12229524-12230654CD3
SE_11902chr1:12231048-12236114CD3
SE_14553chr1:12226279-12230838CD4_Memory_Primary_7pool
SE_14553chr1:12231008-12236205CD4_Memory_Primary_7pool
SE_15480chr1:12231304-12235464CD4_Memory_Primary_8pool
SE_16369chr1:12231214-12235920CD4_Naive_Primary_8pool
SE_16946chr1:12226368-12230517CD4p_CD225int_CD127p_Tmem
SE_16946chr1:12231228-12235850CD4p_CD225int_CD127p_Tmem
SE_17650chr1:12226275-12230861CD4p_CD25-_CD45RAp_Naive
SE_17650chr1:12231292-12241643CD4p_CD25-_CD45RAp_Naive
SE_17827chr1:12226312-12231012CD4p_CD25-_CD45ROp_Memory
SE_17827chr1:12231021-12246713CD4p_CD25-_CD45ROp_Memory
SE_18389chr1:12226183-12250288CD4p_CD25-_Il17-_PMAstim_Th
SE_19117chr1:12225970-12243644CD4p_CD25-_Il17p_PMAstim_Th17
SE_20048chr1:12229525-12230784CD56
SE_20048chr1:12231058-12236137CD56
SE_20873chr1:12231198-12236438CD8_Memory_7pool
SE_22347chr1:12226250-12242299CD8_primiary
SE_26251chr1:12232165-12234254Duodenum_Smooth_Muscle
SE_27503chr1:12231615-12234368Esophagus
SE_30788chr1:12232018-12234343Fetal_Muscle
SE_32030chr1:12229876-12230783Gastric
SE_32030chr1:12231844-12234207Gastric
SE_41498chr1:12226446-12230937Left_Ventricle
SE_41498chr1:12232230-12236136Left_Ventricle
SE_42336chr1:12226659-12230669Lung
SE_42336chr1:12231389-12236106Lung
SE_48967chr1:12232188-12234263Right_Atrium
SE_50250chr1:12226648-12230837Sigmoid_Colon
SE_50250chr1:12231283-12234299Sigmoid_Colon
SE_52522chr1:12229561-12230834Small_Intestine
SE_52522chr1:12231293-12236092Small_Intestine
SE_53313chr1:12226465-12230950Spleen
SE_53313chr1:12231250-12236109Spleen
SE_55394chr1:12232096-12233341Thymus
SE_61096chr1:12184746-12245090HBL1
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr11223209612232448
chr11223169312231881
Enhancer Sequence
CTTTAGAGAT GTGGAAACTG AGGCGTTTCC CAGGATCACA GAGCTGGGGG CCGGGGAGCT 60
GGGGGTGGGA TTTGAATGCA GGTCTGCCTG ATTCCCAAGC TCCTTTCACT GCACCCTCCC 120
CGTGCCCGTA TCTGCACTCA TGCTCCCAGC CAGGCCCTCA CACACAGTGG GTTCTCAGGA 180
TGGAAGTCAA CTGAGCTGCA GAAGAAGCCC CCAGGAGACC TGAGCTAGCC ATGGACGCAG 240
CCGACTCACT GCCAGCAGGG CTTTTGCCCC GTTTAAAAGT CTTATTTGCC AGCTGGTATG 300
GAAAACATCA TTCATTCATT TAGCCATTTA TTCATTTGAC AAAGAAATGC CAGTAAACCT 360
GGCAGTAGGT GAGTGCTTGG TGCCCTCTGA TGGGGATGAG CAGGGTCTGG GCTGTCTGGG 420
GAGGAGGATG AGGGGTCTCT GCCTGATGGG CCTGGCCCAC CTACCCCTGG AAGTCTTGGT 480
GCTGAGGTGC CACTATTTGC CTCCTCATCA CCCAGGGCCT GGGGCCAGTT TGGGTTAGGG 540
GAGAGGTTGG GGGCTCCCAG GCTGGATGTC AAAGAGGAGT TGGGTGATCT GGGGTACCTG 600
CTGGCCCTGG GGGCTCTTCC CTCCTTCCAC CACGTCTCTG TCTCTTTGCC CTCTGTCTGA 660
AATCCCAGTG GGGACCCTGT GTGTTGACTG AGGGTGTGGT CTGTTGGTCA GGCACGTCTT 720
CAGAGGGCAA TGGGTAGGTG GCCAGGCACC CTGAGGCAGG GCCATTCATT CATTCATTCA 780
TTCCCCAAAG TTCATGGACA CACCTAGTCC AAGCCCAGCC CAGTGCCTGG CTCTGGGGAC 840
CTCAAGATGA CTCCAGCTCC AATCCTCTAG GAGCTACACT ACCAATAGGT CACAGACCTC 900
ACAGACCTGG GCTCTGTCCC AACTGCCCTT ATGAGCTTAG CTGAGCTAGT AAGCCTATGT 960
TCTCATCTGT GGTTGTGGAA AGTATTCCCT GCCTGGCCTT TGTCACAGAG CCATGGGTGT 1020
GAAAGGCTGA GAACCTGCCG GGCATTCTTA CGTCAGAGGT GACCCTGCCA TCCTGGCACC 1080
TGGCACAGTG GCTCCCCGTA GCACTGTCCC TCCCCACGGC TGGGTGACGC TTTATGGTCC 1140
TTACTATGCA ATGTTTTCTG GAGGAGTAGC AGGGACGGTT GTGCGTGGGA AGGGGAAGAG 1200
TTTTGCCGGA GCCATGGCAT GTATGTTACA CCCGACTCTA CACCAACTCA CTTCTTACTT 1260
TTTTTCTGAG ATGGAGTCTT GCTCTGTTGC TCAGGCTGGA GTGCAGTGGC GACATCTCTG 1320
CTCACTGCAG TCTCCATCTG CCTCTTGGGT TCAAACGATT CTCCTGCCTC AGCCTCCAGA 1380
GTAGCTGGGA CTACAGGCAT GCACCACCAT GCCCAACTAA TTTTTTTTTT TTTTGTATTT 1440
TTAGTAGAGT CGGGGTTTCA CCATATTGCC CAGGATGGTC TTGGACCCCT GACCTCAAGT 1500
GATCCTCCCG CCTCAGCCTC CCAAAGTGCT GGGATTACAA GCATGTGCCA CTGTGCCTGG 1560
CCCGTTCTCA CTTCTTCTTC TTTTTTTCTA TTTAATTTTT TTTTATTGAG ATAGAGTCTT 1620
ACTCTGTCAC CCAGGCTGGA GTGCAGTGGC CCAATCTCTG CTCACTGCAA CCTCCACCTC 1680
CTGGGTTCAA GCAATTTTCC CACCTCAGCC TCCCAAGTAG CTGGGATTAC AGGTGTGTGC 1740
CACCATGCCC GGCTAATTTT TCCTTTTTTT TTTTTTTTTT AGTAGAGACC GGGTTTTGCC 1800
ATGTTGGCCA GGCTGGTCTC GAACTCCTGA ACTCAAGTGA TCCACCTGCC TCGGCCTCCC 1860
GAAGTGCTGG GATTATAGGC GTGAGCCACC CCACCCAGCC CCATTCTCAC TTTTAAGCCA 1920
TGCTTTTCTG TCCTCAGATG TGCTGCACAC ACACCTGCTC CAGGGCCTTT GCACTTGCTT 1980
TCCCCATCAC CTCCAATACT CCTCCTGCTG ACGTCTCTTG GTCTCCTTCC CTCGCTTCCT 2040
TCTGCTGAAG TAGACAATCC TGCCTGTAGG TGCTCCCTGC CAGGCACTCT CACTCCCTGA 2100
CCTGCTTTGT ATTCCTGTAT AATGCTCTTG ACCTATTCTA TTTATTTCAC TTTTATTATG 2160
TCTTCCCACA AGATTGTAAG TACCGTGAGG ACAGGGACTC ATTCACCACT GTAGACTCTA 2220
GCCTAGAAGA GGGTTTTTCA GTCAGTGCCT CTGACTTTAA TTCTTTGTTG TGGGGCTGTC 2280
CCGTGAGCTG TAGGATGTTT AGCGACATCC CTGGCCTCTA CTTATTGGAT GGCAGTAGCG 2340
CCACCCTCCC TCGTGACAAA AATATCTCCA GATATTGCTA AGTGTCCTTT GGGGTTGGGG 2400
GATTGCCCCT GATTGAGAAC CACTGGCCTA GGACAGTGCC TGGCACATAG TAAGTGTTCA 2460
AAAAATATTC ATCTGACCTT GACCTTGATA ATGGCCCTGT TTTACAGATG AGACGGGGGT 2520
TTGAAAAGTC AGTGGTGGCA GGGTGGGGTT CTGTTTGCCT CCATCTCTTG GGGTATTTTT 2580
CTGGGCTCCT CTTCCCATTG AGTGGTGTCT GCTGAGGTTA GGGGTCCTCT CCCCAAATTG 2640
CTCACCCCCT CGACATCCCT CGTGTAGTGA GGGATGGGGC CACTCACTGA CGGTGACTCA 2700
GGGCCCCAGA ATGCATGTGA TTTACCCAGA AGCGGGCAAG GAGGGAAGCT GGGGTTTGGG 2760
GTGCCGGGGA TGAACAGGAA CAAAGGAGAG GCGCTGTGGC TCCCCGTTCT GGACCCTCGT 2820
CTGGCCACAG GGAAGCAGCA CTGATGACTC TGGGGAAAGG CCCCGGCCTC TGAATCAGAT 2880
AAACCTCAAG TCGCTGCTCT GCTGTTTTAC TGGCTGTGTG ACCTGGGCAA GTCTTTCTAT 2940
CCCTCGGAGC CTCTGTGTTC TTATCTGTAA AATGGGAGTA ATCCTAGCCT CACGGGCTGG 3000
CTGTCAGGAT TAAAAGTGCT TTCTAATCCT GGCATTGGCA GCTATTTGAG CCATTGGTGG 3060
CTTTGCAGGT CTGACCCGAC TCTCTGGGCC ATGGGGTGGT GCTCGGGCCT AGGTGGGGAC 3120
CCCTGTGGAG 3130