EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS127-06865 
Organism
Homo sapiens 
Tissue/cell
Macrophage 
Coordinate
chr12:12871890-12873850 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs34327chr1212873748hg19
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Arid5aMA0602.1chr12:12873238-12873252GTAATATTGCTAGT+6.12
RORA(var.2)MA0072.1chr12:12873524-12873538TTGACCTAGATTAT-6.07
Number of super-enhancer constituents: 95             
IDCoordinateTissue/cell
SE_01186chr12:12871777-12872411Adrenal_Gland
SE_02384chr12:12868902-12874140Astrocytes
SE_04457chr12:12866333-12873109Brain_Anterior_Caudate
SE_04457chr12:12873497-12874235Brain_Anterior_Caudate
SE_05723chr12:12866231-12873210Brain_Cingulate_Gyrus
SE_06515chr12:12866283-12874405Brain_Hippocampus_Middle
SE_07055chr12:12866558-12874895Brain_Hippocampus_Middle_150
SE_09887chr12:12868450-12880339CD14
SE_10399chr12:12866458-12880207CD19_Primary
SE_11298chr12:12865600-12880701CD20
SE_11994chr12:12866170-12874159CD3
SE_12949chr12:12868575-12874397CD34_Primary_RO01480
SE_13418chr12:12866548-12880168CD34_Primary_RO01536
SE_14132chr12:12866468-12880276CD34_Primary_RO01549
SE_14411chr12:12865413-12880296CD4_Memory_Primary_7pool
SE_15395chr12:12866332-12880213CD4_Memory_Primary_8pool
SE_15847chr12:12866727-12874954CD4_Naive_Primary_7pool
SE_16327chr12:12866196-12880001CD4_Naive_Primary_8pool
SE_16955chr12:12866612-12873060CD4p_CD225int_CD127p_Tmem
SE_16955chr12:12873159-12880224CD4p_CD225int_CD127p_Tmem
SE_17376chr12:12864460-12880572CD4p_CD25-_CD45RAp_Naive
SE_17900chr12:12864058-12880423CD4p_CD25-_CD45ROp_Memory
SE_18684chr12:12864435-12881765CD4p_CD25-_Il17-_PMAstim_Th
SE_19332chr12:12866157-12874863CD4p_CD25-_Il17p_PMAstim_Th17
SE_20110chr12:12866156-12880272CD56
SE_20780chr12:12866352-12880531CD8_Memory_7pool
SE_21484chr12:12866404-12880182CD8_Naive_7pool
SE_21956chr12:12866319-12880303CD8_Naive_8pool
SE_22655chr12:12864839-12880863CD8_primiary
SE_23308chr12:12868228-12872897Colon_Crypt_1
SE_23308chr12:12872979-12873396Colon_Crypt_1
SE_23308chr12:12873429-12874032Colon_Crypt_1
SE_24059chr12:12869578-12872303Colon_Crypt_2
SE_24059chr12:12873529-12873857Colon_Crypt_2
SE_24811chr12:12866794-12874402Colon_Crypt_3
SE_25539chr12:12866389-12880419DND41
SE_25894chr12:12866522-12880284Duodenum_Smooth_Muscle
SE_26782chr12:12866182-12872906Esophagus
SE_26782chr12:12872950-12873339Esophagus
SE_26782chr12:12873387-12874003Esophagus
SE_27782chr12:12866447-12880286Fetal_Intestine
SE_28763chr12:12866136-12880477Fetal_Intestine_Large
SE_29913chr12:12866618-12873244Fetal_Muscle
SE_31002chr12:12866681-12880229Fetal_Thymus
SE_31618chr12:12868106-12872357Gastric
SE_31618chr12:12872952-12873356Gastric
SE_31618chr12:12873459-12874001Gastric
SE_32681chr12:12866549-12880237GM12878
SE_34475chr12:12868560-12872792HCT-116
SE_34475chr12:12873497-12880183HCT-116
SE_34820chr12:12866829-12880543HeLa
SE_36464chr12:12868308-12880283HMEC
SE_38391chr12:12866702-12880599HUVEC
SE_39245chr12:12867003-12874377IMR90
SE_40553chr12:12867406-12873295K562
SE_41095chr12:12866882-12872483Left_Ventricle
SE_42460chr12:12866643-12872596Lung
SE_42460chr12:12872886-12873356Lung
SE_42460chr12:12873457-12874016Lung
SE_43548chr12:12866480-12882430MM1S
SE_44374chr12:12866822-12878388NHDF-Ad
SE_44929chr12:12868333-12874056NHLF
SE_45697chr12:12866923-12883385Osteoblasts
SE_47372chr12:12866831-12880785Panc1
SE_49170chr12:12866985-12872428Right_Atrium
SE_50256chr12:12866169-12873359Sigmoid_Colon
SE_50256chr12:12873447-12874067Sigmoid_Colon
SE_52464chr12:12866121-12873345Small_Intestine
SE_52464chr12:12873477-12873995Small_Intestine
SE_53337chr12:12866446-12873324Spleen
SE_53337chr12:12873391-12874036Spleen
SE_55147chr12:12866568-12872760Thymus
SE_55147chr12:12873057-12873315Thymus
SE_55147chr12:12873462-12873879Thymus
SE_56035chr12:12868163-12880937u87
SE_56779chr12:12870249-12872897VACO_400
SE_56779chr12:12872922-12874242VACO_400
SE_57463chr12:12870266-12872370VACO_503
SE_58171chr12:12868216-12872365VACO_9m
SE_58171chr12:12872432-12872891VACO_9m
SE_58171chr12:12872971-12873413VACO_9m
SE_58171chr12:12873437-12874193VACO_9m
SE_58660chr12:12866615-12880708Ly1
SE_59018chr12:12866646-12880318Ly3
SE_61268chr12:12866751-12890857HBL1
SE_61621chr12:12866181-12890888Toledo
SE_62220chr12:12864939-12895381Tonsil
SE_64690chr12:12867061-12880259NHEK
SE_66441chr12:12870343-12873022Jurkat
SE_66441chr12:12873372-12878121Jurkat
SE_67164chr12:12866480-12882430MM1S
SE_68213chr12:12866940-12880202TC32
SE_68492chr12:12866960-12880043TC71
SE_68493chr12:12866960-12880043TC71
SE_68494chr12:12866960-12880043TC71
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr121287247012873013
Enhancer Sequence
GGGTTGATCA CTAAAGGAGC ACGCACTGGA ACCCGGGGCC TTCAGACCTC ACGATACCTG 60
ATCTTACTGG TTGCTGGCAA ATTAAAAGCT TATGGGGTTT TGTTTTGTTT ATACTTCGTG 120
AGGTCAAAAA AGTAGCAATG GGGAAGGCTG GGGATACGGT AATTCCTCAG AGTTTCTATG 180
CCCAGAGATA CTTTCTCTTC AAACTGTTGA CCAGAGCAGC TACTTGTAAC CCAGGCCCCA 240
TCGGGTAGGA AGGTCGTTTC CCTGTGAGTC CCACTAAAAC GTGTTGGGAG CAATAGGTTC 300
TTTGCCCATC CGAACAAGAA CTAGGGTACT CCCTCAGTCC GAATTAATGA GAATTAATTT 360
CCTAGAGGTT CAGCTTGAGT CGGTAACAGA TTTTGAGCCA TACATGGAAA AATGGCAAAT 420
ACATGATTAA GTTTCAATTT TGAGGGGGAA TGTTTGGTAG AAATTGCTCA TCTTTGGTTA 480
TGCAAGGGAT TAGAGATGTG AATAGGATGG TATGTTGTGT TCTTTGACAT TTTAATAAAC 540
TGTCACTTTC CCTGTTGTCT CCTAAGTTTG GAGAGAGAAG GAACCAGTAT TTGCAAAAAC 600
CAAATGGAAA GATAAAAAAG TTACTAAAGT TTCTACAGAA TTTCTGGTAA CACTGAAGTT 660
GCAAAGCAGA AGTTAAATTA ACTCTTGTCA GTAAGCAATC CAGGAACACG TCAGCCAGTG 720
TATGCTAATT GTGCCGTAAC AGGGTGATTT GGATATTTGT AGGGGAAATG GGTAGTAAAT 780
ATCAAGACTG GTGACCGTAG GTCAGCCCAG CACAAAGGAA GTGGAGATTT TTCCATGCAC 840
AAGAATCTGA TCACTGTAAA TAGCTAATTT GAATAATTCA GTCCCCAGAT AACCAACATG 900
GGTTGGTTAT TCATAATAAA CTACATATTT TAATAGTTTA TTAGCTTCCT TTAGACCAAG 960
ACTGTGACCT CTTTATTTTC TAAAGCACAC ACGTAGTTTA GCATATGAGG CGATAAAATA 1020
TTGATGTTAA CTTTTTAAAT CCCCAGTTAT AAAAATTTTA AAATAACAGG GATTAAGGTG 1080
AGATTCAGGT TTGTTGTGTC TTTAAATTGT ATATGTGACT TCACATATCT TTTTCAGCGC 1140
TTATACAAAA CGGCACTATA GAACCTCCAT TTTACAGCAC CATATGAAGT GGGAAAATTA 1200
GGTGAAAATT TTCCTGAAGC AACCTTAACA TGCGCAGCCC TTGTTGGTTT GTGACTTGTG 1260
GCCTAGCTCA TCAGATGAGC CACGAGAATC AGACCTGGAT TTTGATCTGG CCCTGTTCTG 1320
ACATGCAATG AGGCATTTGT AGGATTTAGT AATATTGCTA GTTCAAAGAA TACTAGAAAT 1380
ATTAGTAAGA ACCTATTCAA AAGTATTCAT GAGTATTTTC TGCATATGAA TCAGGAATTA 1440
GAATATTTTG AAAATGATGT TAATAAAATT TTCCTCTGGA AGGCCTTTAT AATTTTTATT 1500
CCCAATCATT TTTCAAATTT AGAAAGTTTA ATCTGTCACA GGAGAAAAAA AATTAAAAAT 1560
TTTCAAAAAT TTAGAAAATT TTTACCCGTA AGTATTACAG TTTCCTAATT ATCCTATTTA 1620
TTTCCCACTT GCCTTTGACC TAGATTATTT AGAGTAGGGT TTCTCAGCCT CTGCACTAAT 1680
GACATTTTGG GCCGAATAAT TCTGTTGTAG GAGGCTGTCC TGTGTGTTTT AGATTGTTTG 1740
GAATTATCCC TGGCCTCTCA CACTAGATGC CAGCAGTATC CTCCTCCCCC AGTGTGACAA 1800
CCTAAAATGT CTCCAGACAT TGCCAAATGT TCCCTGTGGG GCGGGGGCAA CATTGCCTAC 1860
TGTTAAGAAC TACTGCTCTA GACCAAAGAA CACAGCACAG AGGAAAGGAA AAAAAAATCC 1920
AGTTAAGAGA ATGTTAGGTG GAGATGACTA TAGTCATCAA 1960