EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS127-00369 
Organism
Homo sapiens 
Tissue/cell
Macrophage 
Coordinate
chr1:23902970-23905760 
TF binding sites/motifs
Number: 5             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Gata1MA0035.3chr1:23902982-23902993ACAGATAAGGA-6.14
HOXA13MA0650.2chr1:23905153-23905164GTTTTATTGGT-6.32
Nkx3-2MA0122.3chr1:23905146-23905159ATTAAGTGTTTTA-6.16
POU6F1MA0628.1chr1:23905444-23905454ATTAATTAAT+6.02
POU6F1MA0628.1chr1:23905444-23905454ATTAATTAAT-6.02
Number of super-enhancer constituents: 49             
IDCoordinateTissue/cell
SE_01721chr1:23900657-23905229Aorta
SE_01721chr1:23905312-23906115Aorta
SE_02313chr1:23901876-23905526Astrocytes
SE_02990chr1:23903287-23903795Bladder
SE_03649chr1:23903331-23903843Brain_Angular_Gyrus
SE_03649chr1:23903960-23904459Brain_Angular_Gyrus
SE_04396chr1:23902891-23904726Brain_Anterior_Caudate
SE_05716chr1:23903816-23905335Brain_Cingulate_Gyrus
SE_06239chr1:23900696-23905116Brain_Hippocampus_Middle
SE_07293chr1:23902637-23904795Brain_Hippocampus_Middle_150
SE_08579chr1:23902794-23905344Brain_Inferior_Temporal_Lobe
SE_10300chr1:23899372-23906111CD19_Primary
SE_11050chr1:23898822-23908436CD20
SE_18996chr1:23902922-23905455CD4p_CD25-_Il17-_PMAstim_Th
SE_26335chr1:23902515-23905797Duodenum_Smooth_Muscle
SE_27258chr1:23902880-23904675Esophagus
SE_27884chr1:23903017-23904621Fetal_Intestine
SE_28880chr1:23903194-23904813Fetal_Intestine_Large
SE_29676chr1:23901788-23905238Fetal_Muscle
SE_31953chr1:23902935-23903813Gastric
SE_31953chr1:23903835-23904596Gastric
SE_34689chr1:23902272-23905407HeLa
SE_37153chr1:23901250-23906299HSMMtube
SE_38016chr1:23903113-23904896HUVEC
SE_38999chr1:23901867-23905446IMR90
SE_41075chr1:23901556-23905295Left_Ventricle
SE_41075chr1:23905308-23906073Left_Ventricle
SE_42328chr1:23901634-23904721Lung
SE_42328chr1:23904726-23905233Lung
SE_42328chr1:23905280-23906072Lung
SE_44435chr1:23902863-23905477NHDF-Ad
SE_45797chr1:23901058-23906146Osteoblasts
SE_48755chr1:23902917-23904674Right_Atrium
SE_50077chr1:23902728-23906171Sigmoid_Colon
SE_51741chr1:23901781-23905632Skeletal_Muscle_Myoblast
SE_52549chr1:23902842-23905170Small_Intestine
SE_52549chr1:23905280-23906163Small_Intestine
SE_53706chr1:23902697-23905306Spleen
SE_53706chr1:23905407-23905921Spleen
SE_54840chr1:23900793-23905744Stomach_Smooth_Muscle
SE_55341chr1:23903385-23903804Thymus
SE_55341chr1:23903829-23904379Thymus
SE_56054chr1:23901526-23905401u87
SE_58372chr1:23873313-23964782Ly1
SE_63528chr1:23901642-23905713HSMM
SE_68324chr1:23879596-23905390TC32
SE_68325chr1:23879596-23905390TC32
SE_68477chr1:23874949-23904689TC71
SE_68478chr1:23874949-23904689TC71
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr12390460023905142
chr12390371423904323
Number: 1             
IDChromosomeStartEnd
GH01I023572chr12389942723906089
Enhancer Sequence
TGCCTCCATT TTACAGATAA GGAAACTGAG ACACAGAGAG GCTAATTTGC CCAAGACCAC 60
GTGGCTAGCG AGTGGCTACA CTTTCTGAGC CTCGGCTTTC TTGGCTGTTA AATTGATATG 120
TATATACAAG CGCCCTCTGC ATAGCAGGGC TTCTCAGACC CAACACTATT GACATTTTGG 180
GCTGGATAAT TCTTTGTTGT GAGGCTGTCC TGTGCATTGC AGGATGTTTA GCGGTATCCC 240
TGGCCTCTAC CACATAGGGT ATTCACTGCC AAGAGATGCC AGTAGCAACT CCCACTCAAG 300
CTGTGACAAA CCTAAAATGT CCCCTGATCT TGCCAAATGT CCTCTGGGGG CAAAATCAAC 360
CCTAGTTTAG AACCACTGCC TAATAGGATC CTGGGGAGGA TTAAATGAGC TATTTCATAT 420
AAAATACCTT CCGGCAATCC CTTCCCCATT CCTTCCATAA CTCTATGGTG AGTTCTAACT 480
CCTCAGAACC CTCTTGTTCT TTCTGTTCCT CTACTGTTTG GAAAATGTGC CCACCTATGG 540
AGACTGGGTG CTTGAGAGCT TCTTGCAAAT CCAAAGCTGT TCCAGGAGCT AGACCTGATT 600
CCAGTCCTGT CATTTCCACA GACATGCTGT GGGACCTTGG CTGAAGTCCT TCCCCTCCTT 660
GAGCCTCGGT TTCCCCATGT GTACGAGGGG GCTGACCCAG AAGCTTTCCG AAAGGTCTTC 720
TCACTGCAGG AATCAGTGAC TGGGTGATTC ATACCAAGTG CAAATTCCCC TCACAAAGTC 780
CAAATTCTTC CAGCGACTTA GTCATTCCAG GGTTTGAACT TTCTCGCAAA AACCATTTGA 840
AAAATTCTTC CAGCTTAAAA AAAAAAAAAA AAAGCTATTA AAAGAAAGTA AAAGTTTCAA 900
AACCAAATCC TAGGCAAACA ACCCTGAAAA CAATACACAC ACATACATAT ACATACAGCA 960
CCCAAGGTAG CTCTGAGAAC AGGATATGAA ACCTTGCAGG CCGGCACTAA GAAATGATTC 1020
ACAGGCCTTT GAGATGCTTC TATTTCAAGA CACAGTCCAC CCACTGGATC TGGTGGCTCC 1080
AAAAACAAAC TTTCAGCTGC TGTTTCTTAT CGCAGTGTGG TTCGCCTGGC CAGTATCCTT 1140
GGGTCTCAAG AGCTCCAGAC AGAAGACAAG GTTGAGTCCT GTGAATTCCC TTTCTGTTCT 1200
ATTTCAAGCC TCAAGCTGCT GGCTTGTTTA AAGAAAGTCT TTTGCATCCA CCTTTTGGTT 1260
GGCTGACCCG AGTTTAAAGC AACATAGCCT AATGGGTTCG TAGCACAGCC TGCGAATTCA 1320
TAATTTTAGT TTAGCAAGGC CTCTGTGTGG CTCCAGCAAG TCCTACTGGA TCCTGGGCTG 1380
GTCATTCTAG AAGCTGTCTC CAGCTAAACA ATCCTGCCTG GCTTTCCTTA TACATATCAA 1440
TATTATACTT GCCCTAGGCC AGGATTAAGA ATTTTAGCAC AAATTCAAAA TTTCATGCTT 1500
TTATGTAAAA TAGAAATATA AAAGTAATTC ATTCGATGAA ATGCTTACTG AGTGCTCACT 1560
ATATGCCAAG CACCAGCAAT GTACTGGCGA TAAAATACAG CCCCTGCCTT CAGGAGCCAC 1620
ATTGAACAGG AAAAGCAGAC AATCTAAATA TACATAGTAG AAACACATGG AACTATTCCC 1680
TATGGGAAAT GCCCTGCATA AAAAGTGATA CCAAAGTTGG AGCAAAATTG AAAGAAATGC 1740
AAATGCTTGT GATACGGTTA AGTACATTTT CATCTGTACT TACCCTTGAT TTTGTTTTAG 1800
ATTTAGAAAA TCTTGAACTT TCACTGTTGC TTCATTTGCC CTCCAAAAAT CCAGAATCTT 1860
ACAGAAAGGG TCAGTGTCTG GATCAAACAT GTTTCTTATC TAATTTCCTT GCCCCAGTTT 1920
TTGTTTATGC CATCATTGCT GCATGGAGTC CTCCCTCCTC TCCTTGTGTA TCCTCCAAGT 1980
TCTGATGCAA AGCCCACTTC CTCCAGGAAG CATTCGCAGA CCCATCTGGC CACATCCTCG 2040
CTGTTCTCTA AACACACATA TCTCATGCTC TTGACTTGGC CTTTAGCCTG TCCTGCCTTA 2100
TGATCTCTCT TGTACTTCTG TCCTGAAGTT TTATCTAACT TATGAATTGG GGGAAAGAGG 2160
ACAGGCACTG ACATTTATTA AGTGTTTTAT TGGTGACGGG CATTTTGCTA GCTCTTTACT 2220
GTATATAATG TGCCTGGTAT GTAGAAGATG TTCAATAAAT ATTTGTTCAA CGAATGCTTC 2280
AGTGATTTGG CTTAAACCTA ACAATAACCC TATGAGACCA ATTCTATTAG TATTCCCATT 2340
TTACAGATAA GAGAACTGAG GCACAGACAG GTAAAGTCTG CATTTGAGGG CTTTCTGTCT 2400
TAAAAGTTGA AGTTCAGACT TTCTCTTCTT CTCTGTTGCT TTTTTCTGCA AATAGATTTC 2460
CCTGAAGTGT CTTGATTAAT TAATAGGACA TATACTGTGC TCCCTGCTTT ATCCCATCTC 2520
AGGCAATATT ACCTGTTCTC TCCGTTGTGA GCCCATATTT GTATTTCTAC AGTTAGTTTA 2580
GAAACCACTC TGCATCAGGC GTGGTGACTC ACGCCTATAG TCCCAACACT TTGGGGAGGC 2640
TGAGGCGGGT AGATTGCTTG AACTCAGGAG TTCGACATCA GCCTGAGCAA CATGGCAAAA 2700
CCCCATCTCT ACAAAAAAAT GAAAAATTAG CCAGGCCTGG TAGTGCACAT CTGTGGTCTC 2760
AGCTACTGGG GAGGCTGAGG TGGGAGGATC 2790