Tag | Content |
---|
EnhancerAtlas ID | HS122-06866 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr19:13092900-13097440 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:13094556-13094575 | AGGCCAGCAGGGGGCGCGC | + | 6.8 | IRF1 | MA0050.2 | chr19:13097173-13097194 | TTTTTGTTTCTTTTTTATTTT | + | 6.56 | IRF1 | MA0050.2 | chr19:13093654-13093675 | TCTTTCTTTCTCTTTTTCTTT | + | 7 | MYCN | MA0104.4 | chr19:13096240-13096252 | GGCCACGTGGCT | + | 6.37 | MYCN | MA0104.4 | chr19:13096240-13096252 | GGCCACGTGGCT | - | 6.37 | Myod1 | MA0499.1 | chr19:13096154-13096167 | AGGGACAGCTGCG | - | 6.87 | Myog | MA0500.1 | chr19:13096157-13096168 | GACAGCTGCGG | + | 6.32 | RREB1 | MA0073.1 | chr19:13095055-13095075 | GGTTTGGGTGTGGTTGTGGG | - | 6.13 | RREB1 | MA0073.1 | chr19:13095044-13095064 | TGGGTGTCTGTGGTTTGGGT | - | 6.2 | RREB1 | MA0073.1 | chr19:13095220-13095240 | TGGGTGTCTGTGGTTTGGGT | - | 6.2 | RREB1 | MA0073.1 | chr19:13095121-13095141 | TGTGTGTGTGTGTGTGGTGG | - | 6.41 | RREB1 | MA0073.1 | chr19:13095297-13095317 | TGTGTGTGTGTGTGTGGTGG | - | 6.41 | RUNX1 | MA0002.2 | chr19:13095049-13095060 | GTCTGTGGTTT | + | 6.62 | RUNX1 | MA0002.2 | chr19:13095225-13095236 | GTCTGTGGTTT | + | 6.62 | SPIC | MA0687.1 | chr19:13094723-13094737 | AGAAAGGGGAAGAA | + | 6.03 | ZNF263 | MA0528.1 | chr19:13094718-13094739 | AAGGGAGAAAGGGGAAGAAGG | + | 6.14 | ZNF263 | MA0528.1 | chr19:13094713-13094734 | GGAGGAAGGGAGAAAGGGGAA | + | 6.88 | ZNF263 | MA0528.1 | chr19:13094710-13094731 | GAAGGAGGAAGGGAGAAAGGG | + | 7.69 | Zfx | MA0146.2 | chr19:13093982-13093996 | CCCGCCTCGGCCTC | + | 6.01 |
|
| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_03137 | chr19:13094610-13097207 | Brain_Angular_Gyrus | SE_03859 | chr19:13093687-13094468 | Brain_Anterior_Caudate | SE_03859 | chr19:13094540-13097369 | Brain_Anterior_Caudate | SE_06678 | chr19:13093373-13097624 | Brain_Hippocampus_Middle_150 | SE_07717 | chr19:13093539-13097418 | Brain_Inferior_Temporal_Lobe | SE_29659 | chr19:13095067-13097280 | Fetal_Muscle | SE_31390 | chr19:13094935-13097245 | Gastric | SE_41557 | chr19:13094580-13095599 | LNCaP | SE_44148 | chr19:13095560-13096817 | NHDF-Ad | SE_44758 | chr19:13093854-13094419 | NHLF | SE_50434 | chr19:13095031-13097276 | Sigmoid_Colon | SE_51076 | chr19:13094798-13097185 | Skeletal_Muscle |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr19 | 13094031 | 13097172 | chr19 | 13095012 | 13097000 | chr19 | 13094405 | 13094796 | chr19 | 13094000 | 13094441 | chr19 | 13095998 | 13096573 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I012983 | chr19 | 13093992 | 13097240 |
|
Enhancer Sequence | CTTCTTTCCC CTTTTGTGTC TCATTTCTCC CACTCCATCT CCTCTTGTCC ATTCTTCCCA 60 GCCCTAAATC TTCTCCTATT TATGTCTCTT TTCATCTCTC TCCTTTTCTC CTAATTTTTC 120 CCTGTCCCTC TCATCTCCCT ATCTCTCCTC CTTTTTTCTC TTGTTTATTT ATGTATTTAT 180 TTTGAGACAG AGTCTCGCTC TGTCACCCAG GCTGGAGTGC AGTGGCGTCA TCTCTGCTCA 240 CTGCAGCCTC CACCTCCCAC ATTCAAGCAA TTCTCGTGCC CCAGCCTCCG GAGTAGCTGG 300 AATTACAGGC ACGTACCACC ACACCCGGCT ACTTTTTGTA TTTTTAGTAG AGACGGGGGT 360 TTCTCCATGT TGGCCAGGCT GGTCTCGAAC TCCTGACCTC AAATGATCCG CCCACTTCGG 420 CCTCCCAAAG TGCTAGGATT ACAGGTGTGA ACCCCCATGC TCGGCCTCCT CTCTCCCTTT 480 ATCTCTGTCT CTTCCCGTTT TTTTTCTCTC CCAGTGTCTC CTTATCTGCC TCTCCCTGCC 540 TAGTCTCCCG TCTCTCTCCA TCTCTCAGTC TCCGCATCTC TTCTCTCATC ATGTCTCTCC 600 CATCTTTTTT CCCCTCATTT CTCTGTCTCT CAGTCTCTCC AGCTTTTCCT GTGTCTCTGT 660 CTCTCCCCAT CTCTGTCTCT CCATACCCAG TCCCCATGTC TCTCCATCTC CATGTCTCCC 720 CATCTCTTCT CTCTCCCCAT CTCTCTCATC TCTTTCTTTC TTTCTCTTTT TCTTTCTCTC 780 TCTCTCTCTC TCTCTCTCTC TCTCTCGCTT TCTTTCCTCT CTTTCTCTGT CTCTCTCTCT 840 CTCTCTCCTT TCTTTCTTTC TGACGGAGTC TCACTCTGTC GCCAGGCTGG AGTGTAGTGG 900 GGAGATCTTG GCTCAGTGCA ACCTCTGCCT CCCGGGTTCA AGCGATTCTC CTGCTTCAGC 960 CTCCCGAATA GCTGGGACTA CAGGCGCGCA CCACCATGCC CGGCTAATTT TTTGTATTTT 1020 AGTAGAGACA GGATTTCATC ATGTTGGGCT GGATAGTCTC GATCTCCTGA CCTCGTGATC 1080 GGCCCGCCTC GGCCTCCTAA AGTGCTGGGA TTACACTGCG CTCGGCCTCT CATCTGTTTC 1140 TTTCCCCATC CTTCTGTCTC TCAATCTCTC CAGCTTTCTC CGGCCCTCCC AGTGTCTTCA 1200 TCTCTCCCCA TTTCTGTCTC TCCCCACCAG GTCTCCCTAT CTCTTCCCAT CTCTCTCCGC 1260 ATCTCTGGGT CTCCCATCTC TGGTCTCTCC CTGTCTCTCT TTTTTCTCTC CCCATTTCTC 1320 TGTCTCTCCC CATCTCCGTC TCTCTCATCT CTGGTCTCTC TCATCTCTGG TCTCTCCCTG 1380 TCTCTCCTGT CTTTTTCCCT CCCCATTTCT CTGTCTCTCC CCATCCCGGT CTCCCCGTCT 1440 CTGTCGGCCC GGGTGGGTCC GGGTGGGTCC GGGACGGCCC GGCCCGGGCG CCGCGGCGAA 1500 CAATGCCCCA TTCACGCGGG CCGCCGGCGC CATGGCAACG CGCCCGCCCC GCCCTCCCTG 1560 CGCGCGGGCC GCGCGTGCCA AGAGGATGCC ATGGTTACGT CAGGCGCGTG CCCGTCGCGC 1620 GCGCCGCCGT CCCGCGCGCT CTTGCAGGGA GGGGCCAGGC CAGCAGGGGG CGCGCGGCAG 1680 TAGCCTCTGC CCGGAGTCAG AAGGGGCGGT CTTCCCCACT TCAAGGGGCC TTCAGCTGCT 1740 TAGTGCCTCA GTTTCCCCAT CTGTAAAACG GGGGCGATGG GCAAAGCTAG ATCGGAGTGT 1800 GAAAGAGACA GAAGGAGGAA GGGAGAAAGG GGAAGAAGGC GGCGGTGCTC CTTGGGGATG 1860 GTTGTGTGTC TGAGTTTGCA TGAGTCAGTG GGTATATGTG TGTGCGAATT TGTGGGTCCA 1920 TGTTTGCGCG CTTGTGTGGG TGTTTTATGA GAAGTTGAGA AGTGGTTGGT TGTAATTTGG 1980 GGGTGACTTG GGGCCCATGT GTTTGGAAGT GTGTGTGTTT GTATTTGCAC ACTTGTGTGT 2040 GATGGTATTA GCCGGTATCA TTTGTGTGTG ATAATGTGTC CGTGTGTTTG TGGTCCTGTG 2100 ATTGTGCACC CCATGTTTGC CTGTCTGGTG TGTGGTGTGT ATAGTGGGTG TCTGTGGTTT 2160 GGGTGTGGTT GTGGGTTCGG GGAACTATGT GTCCCATGTT TGCATGTCTG GGGTGTGTGT 2220 GTGTGTGTGT GTGTGTGGTG GGTGTCTATA ATTTGGGTGT GGTTGTGAGT TCATGTAACT 2280 GAACCCCATG TCTGAATGTC TGGTGTGTGT ATGTGTATGA TGGGTGTCTG TGGTTTGGGT 2340 GTGGTCGTAT GGTTGTGAGT TCATGTGACT GTGCACCATG TTTGCATGTC TGGTGTGTGT 2400 GTGTGTGTGT GTGGTGGGTG TCTATGGTTT GGATGTGGTG TGTGTGGCTG TGTTTGCATG 2460 CCTGGTGAGT GTGTGTATGG GTGTATGTGT GTCTGTGATG GTGGATGGCT GTGTTGTTGG 2520 GTGTGATTGT GAGTTTGTGT GAATGTTGTT TGCGTGTCAC GGGGCCTGTG TTCACAAACT 2580 CACGTGTGCT TCTGTGTGGA ACTGGGTGTG GGTTCTGAGG ACTTCGGGGA CCTGGCCAAG 2640 TCTCCCTCCC CCACCTGGGG GCCTCCTGGC ACGGAAGGGG GTGACCAGCT GCCTGGGACC 2700 TCCGACTCCC CACAGGTTCA GGAGAGCCCC AGCTGATGAA TATTCATGAG GTGGGGGGGC 2760 TGGCACCCAC TGCCAACAGC TGCGTGTCCA TTAGTCCCCC TCCCTGCTCT TCCTGTACTG 2820 ACTGCAAAGG GGAGGGGGGG TGTCGGCGTG TGTCTGTCCC TGTTTCCAAG ACTCGGGGGC 2880 GGGGGTGTCC TAGGGACAAT CGTGGGGGCC CAGTCAGCAT GCCTGGCTGC TTGTGTGGAC 2940 GGCTAAGGGG CTGTCTCAAT GTTGTGACAG GCACTGGGAG AGTGACTGTT GTGTGACAGG 3000 TTGTCCTTGT AATCGTGGTG AGGCTGTCAC CCACGGTTGC ATTGTAGCTC CTTGGTCTGG 3060 GGACTGTGGG CGTTGTGTGG CAGCGTGAGT GAGCTGTGTA CCTGTCACCT GCAACAGGGA 3120 GACTGTGAGT GTGTGCTATT CGAGTGACTG TGACCAGTGG TCTGTACCTA CTGGCTGCCT 3180 GCTCTGTGAC ACAGTGACAA CAAGGGTGTG TTATTGTGCT ATTGGAATAA CTGGGTTGGT 3240 TCAAACCTTG ATCAAGGGAC AGCTGCGGTC TGCACCCTGG GGAGGCAGTG GTCAGAGCTG 3300 CTTTTCCTCC TTGTGACTGG GTGGGGCGGT GACTCCGTGT GGCCACGTGG CTAGCACAGC 3360 TGCAGGGACA TGCGGACTGA GTATATCAGT GTGCCTCTGC TGGCCAGTGT GACGTTGATG 3420 TGGTGTGAGG GTCAGAGTGT CGGGGTTCCT GGGAGGATGT GTGAGACCGT GCAGCTGAGG 3480 TGTGTGTCAC CAGAATTGTC AAGGGTGTGA CCGTAGTTCT TCATGTGACA GCGTGGCTGA 3540 GGGTGTGATG GTGTTGCTGT GCAGGTGACA CTGTGGCAGT GAATGCGTGG ATCTTTGTGT 3600 GGTTGAAGGT GTGACAGTGA TTGTGTTTGA TGATCTGAAC CAAAGGGCTA TGACTGTCCT 3660 ACCCTCACTT CCAGGCTGCA CAGGGAGAGC TGGGTGCTGG AGTGAGGGGG CTCCTGGCAT 3720 GGGATTGGCA GCTGCCTCGC CAGGGGCCGC ACGTCAGCCT GAGACTGGGA CACCTGGAGA 3780 TCTGATGCCA GCTGGGGCAC AGAACCTCCT CCCTCCATCT TCCCCTCCAT AGGCTGGGTT 3840 TGGAGGAGTG GCCTCTAGAT GCAGCTGGGA CCAGCAGGGG GTGGGGCGGG ATGTGCTTCT 3900 CTGGTCTAGG GGACTCTGGC CTCTGGCTGG GTGGCCCTGG AGGCCCCAGG TTCCCAGCAT 3960 ACGTGGCTTG GCCAGGAACT CAGTGTGGCC GACTCAGCCC CTCTGATACC CACACCCTGG 4020 GACGGCTGAG CATTGCTGGC GGCCCCAGCG GCAGCGCACA GAGGCTCCTT TCACGAGCCA 4080 GGGCCAGGTT TCCAGGGCGG GTGGGTCTCC GGCTGGCCCG CTGCAAATGA AACGTTTCCC 4140 CAGCTCCTTC CCTTTCGTCT CCAGATGAGC GACGGCCACA GGAGGCCCTG GCCAGGCTGT 4200 GCTGCCTAGG CAAGTGTGAG TGTGTGTCTG TGTTTCCCTG TGTGTGTGCA CGATCTAGAT 4260 ATCTTTGTGT GACTTTTTGT TTCTTTTTTA TTTTTTTTCA AGACAGAGTC TCACTCTGTC 4320 ACCCAGGCTG GAGTGCAGTG GCACGATCTC AGCTCACTGC AATCTCCGCC TCCCAGGTTC 4380 AAGTGATTCT CCTGCCTCAG CCTCCCAAAT AGCTGGGATT GCAGGTGTGC GCCACCATGC 4440 CCTGCTAATT TTTGTATTTT TAGTAGAGAT GGGGTTTTGC CATGTTGGCT AAGCTGGTCT 4500 CAAACTCCTG ACCTCAGGTG ATCCACCCAT CTCAGCCTCC 4540
|