Tag | Content |
---|
EnhancerAtlas ID | HS122-06653 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr18:55475330-55475970 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFAT5 | MA0606.1 | chr18:55475671-55475681 | ATTTTCCATT | + | 6.02 | NFATC1 | MA0624.1 | chr18:55475671-55475681 | ATTTTCCATT | + | 6.02 | NFATC3 | MA0625.1 | chr18:55475671-55475681 | ATTTTCCATT | + | 6.02 |
|
| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_26257 | chr18:55473922-55476771 | Duodenum_Smooth_Muscle | SE_38045 | chr18:55473256-55477440 | HUVEC | SE_39235 | chr18:55473479-55475888 | IMR90 | SE_45764 | chr18:55473215-55477377 | Osteoblasts | SE_68345 | chr18:55435973-55476607 | TC32 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH18I057806 | chr18 | 55473481 | 55477134 |
|
Enhancer Sequence | CTTAACATGC ATAAAATGTT ACAGGAGGAA TTATTCATGT TATTAAAATT CACTTCCCTT 60 TCTTTTGTAT TCATAAGCAT GCAAATGTGT AGGATTGTCT ACCATTCTTT TCTACAAGGA 120 AGAGATTTTA ATAAACCACT TACTGTATTT CTCTATGGAA ATGTAATAAA CATTACCTGA 180 TGTTGATAAT GTAACACCAG TTAAACTTAA TGAGTAAAAT TAATACAGAC AGTTCATGAA 240 TAATTTTCCA AAATAACTTG CGATTGTTGT TAGTATATGT CGCCATGTGT TCCTGTAGTT 300 GTAGGAAGTT TGTATGTATT ATCTTAGGCT CTGTTCTCAT CATTTTCCAT TGTGTCATGA 360 AAACACATTT ACCTTTTGGA CTTTATCCCT CTTCCTTCCT GACCTGCACC CTAAATGTGG 420 CTAATTCCAG GTTGCTGTGA ATAGAAGTTT ACTAGATTTT TTTTTTTTTT TTGAGACAGT 480 CTCACTCTGT CGACAGGCTG GAGTGCAGTG GCGCGATCTC AGCTTGCTGC AATCTCCACC 540 TCCCAGGCTC AAGTGATTCT CCTGCCTCAG CCTCCCAAGT AGCTGGGATT ACAGGCACGC 600 ACAACTACGC CCAGCTAGTT TTTGTATTTT TTTGTAGAGA 640
|