Tag | Content |
---|
EnhancerAtlas ID | HS122-01237 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr1:208356210-208359020 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Arid3b | MA0601.1 | chr1:208357277-208357288 | ATATTAATTAA | + | 6.62 | LMX1B | MA0703.2 | chr1:208357280-208357291 | TTAATTAAAAT | - | 6.62 | RREB1 | MA0073.1 | chr1:208356950-208356970 | GAGGGGGGGGTCTTTGGGGG | - | 6.08 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_23661 | chr1:208355735-208357908 | Colon_Crypt_1 | SE_23661 | chr1:208357955-208358868 | Colon_Crypt_1 | SE_31633 | chr1:208355878-208357061 | Gastric | SE_31633 | chr1:208357397-208358885 | Gastric | SE_33895 | chr1:208356937-208358912 | HCC1954 | SE_54968 | chr1:208355867-208359565 | Stomach_Smooth_Muscle | SE_58948 | chr1:208347899-208379506 | Ly3 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I208176 | chr1 | 208349541 | 208359979 |
|
Enhancer Sequence | TTCTGGCTAG GGGTAGGGGA CAGTAAAAGC CAAGGAGCCA AGATCAGAAA AAGGAATAGC 60 TTCTTCCCAT GTGGAATCAA GCTGGGGCTG CCAACCTCCT AGTCAAGAAA GAAAGCTTTT 120 CCTCTCTCTT CCTCCTGTTT ACCCACAGCG ACTGGGGGAG GCTGTACAGA GAGGCAGGTT 180 GAATGTATTC AGTCTGGGAT AGGGAGGGAA AGTTCCTCTG GGGCTCCCCC TTCGTCTAGG 240 GGAGAGGTCA GAAGAACAAA GGTCACAGAT GGACCTGCCA TGATATGGGA GGAGGCACAT 300 GTGTTGCAGT GAGCCATGGA GGGTGGGGGC ACAAGAGTTT GGCAACTCAG ACAGGGGAGA 360 AGCCACTGAT GGCTTATAAA CCAGACAAGG TTCATCCTGA ATCCGGAGGG AGGGCAGTGA 420 GAGCCCCATG AACTCACTTT CTTGAATGTC ACTAACATTT CATTTCACCC TCACTCTGCC 480 TTCCTGTCTC TTTTTTTCTC TTTCTCCCTT AACCTTCCTC AGCAGGGGAT GGGGGAGTAG 540 AGGGAGCCGG AAAGGAGGTC TGCAGGCCTC GTTGACTCTG CTGACCATCC ACAGCCAGGA 600 GCTGTTGCTG ACAGAAAAGA AATGAAGGGG CAGAGATGGG AGGGAAACCA GATGTCCGCA 660 GTTGCAGCAC CATTCTGCGC AGCGTCCCCA CTGGGGTCCC TGCTGTAGAC GAGAAGCCAG 720 AGCCAGGTGC CAGAGAGGGA GAGGGGGGGG TCTTTGGGGG TGGGGGACGG TGCTGGGCCC 780 CACTCCTGCT TATCTACCCC TCAGTTTCTT TTACCTGGGA AACAGATCAC CAAGAGAGGC 840 CCGTCTGATG CTTTAAGCTG GGAATTTGGT TTATTCTGGG GCAGATGAAA AAGAAATTGC 900 ACTGTAGCAT CTTACAAAAC TGCCCCCTTT TCAACTGGGA CTGAGAGTTG GAGACTTTTC 960 CTTTAGGCTT TCATGGTACC CTAGACTTCT AAGTTATTTC TACTTCATAT TCTAGAACTG 1020 TACCATCCAG TGTAATAGCC ACTAGCCACA GGTAGCTATT TATCCTTATA TTAATTAAAA 1080 TTAAGTAAAA TAAGAAATTC AGCTTTTCAG GCACACTAAT ATATGTCAAT CTCTCAATAG 1140 CCACATGTAG CTAGTGGCTA TTGTATTGAA CAGCACAGAT ATAAAAGTTT TTTCTCATCA 1200 CAGAATGTTA TCTTGGACAG TGCTGTTCTA GGAAGTTTTT ACTCAAGTGT AACTTTCATT 1260 CTTGATTTCC CCAGATGTTC ACATGATAGC CTGCTCCTTA GGAATGAGGG CTAACTGGCC 1320 CAGAGGATAG ATGTGGGGTG GGTTGAGACA GGGAGGAGGG AAGGGACGGG TAAGAATGTT 1380 TATTCTGCCA ACCCGAAGGT TTTCTTTAGA CTCTGAGTCT CTTTGCCAGT CCTAAGCAAT 1440 TTAACTTGCC TGGGGAGGAA GGGGGACGCT GTCTGTAGCA AAAGAGGAAT TCAGGTGGTA 1500 GCTACAGCCA AATAGGTTTT GCAATCATAT TCTGCCTCCC TTCTCCACCC CCTGCTTAAA 1560 AAAAAAAAAA CCAAGGAAAG TATACCAAGG CCAGCCCTAG ATAATGTGGG TGTGGTGTCA 1620 TTACCCTGAC TTACTCATCA CACCCCAGGG CCTCTACAGG GTTGGGTGTA GGCAGGGATG 1680 GAAGGGGCAC ACAGGCTGGG GATGAAGCAA GCAGTTATGC TTCAGTCAAT CTTGAAAGCT 1740 GTTGACATGA TGGAGATGGA ATGAGAGATG TTAAAGCCAG ATATTGGGCA CACCCAGCAA 1800 AGCCTCCCGC CCAGCTCACC CTTGAGCCTG CGCTGCTTTA CTCACATTAA GAGATCCGCT 1860 GGTGCAGAGA AATCACAAAG AGTACACACA CACACACACA CGCCTCATGC AGTTCCAGGG 1920 AGATTTCTGG AAAGAATCTT TAGCCCAATT TCTCAGTAAG CCTCAGCTGT TCCCCCAGGC 1980 TTAAGCGGGG GGCCAGCAGA TGGTCCCAGC TAAATAGGCA AGCCTCCCAG TTCCTCTAAA 2040 AGCAGGGTCT GGGCCCTTCC AAGCCCAACA GTCCAATTAA GCTTTTTGCC CACAGGTGGA 2100 AGCAAAAATG AATTTGGGGC CATTCTTCCC TTCTTTTAGG CATGGAGCAC TCAGCCCTCC 2160 CATCAGCCCC CTCCCTACTC CTGGCATTGG CCCATAAGGA ATCCCTGCCT CTCACACTCT 2220 GCTCTGAACA TTAGGTTCCT CAGGGATCAA AGACTCCCAG AAAGATTTCC TTCTAAGGTG 2280 TCTTCTAGGC TGCAGGGATT TGACTGAACC GTTCAAAGGA AAACTCCTGG CTTGGCCTTG 2340 TTAAGGAGGC CCTCTCAGTC CAGGAGGTGG GGCCTCTCAG GATTAAGGCC ACAGATCCAG 2400 GTACCTTCGA TGATGTTCTT ATTTCCTTTT CCCAAGGGCC AGAAAGTGCT GCAGGGAGAT 2460 CCTGGTGCCC TGCTCTTCTC TAGAGGCCTC TCCTCGCTGC AGAGCTCATT GGCATGACTG 2520 GCATAAATAT ATCCATATAT CTCTCTATAA ATATACATGT CTTTAGCTAT ATATATCTTT 2580 TCTTCTAAAG ACTTGGCAAG AATTCCCTAC AATCCTTTTC CATGACACTA TAGAAAATCA 2640 GCAGAGTCAT CAGTTTGATG GTTCCCACAA AGACTGCTTG GGGTTGACCT CTGCAAAGCT 2700 CCCTTGAATC TTGCTTCCAG TAACCCAACC TCTTCAGCCC TCGCCAGCCC CCAACCCCCT 2760 GGCAACACAA AACACAACTC GATTTCCTGA AGCTGAAGCT GCCCCTTTAT 2810
|