Tag | Content |
---|
EnhancerAtlas ID | HS122-00324 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr1:43388020-43391050 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF5 | MA0599.1 | chr1:43390442-43390452 | GGGGCGGGGC | - | 6.02 | RREB1 | MA0073.1 | chr1:43390569-43390589 | ACCCCACCCCACCCCACCCC | + | 6.22 | RREB1 | MA0073.1 | chr1:43390574-43390594 | ACCCCACCCCACCCCACCCC | + | 6.22 | RREB1 | MA0073.1 | chr1:43390575-43390595 | CCCCACCCCACCCCACCCCG | + | 7.29 | RREB1 | MA0073.1 | chr1:43388995-43389015 | GGGTTGGGGTTGAGTGGGGG | - | 7.54 | RREB1 | MA0073.1 | chr1:43390565-43390585 | CCCCACCCCACCCCACCCCA | + | 7.67 | RREB1 | MA0073.1 | chr1:43390570-43390590 | CCCCACCCCACCCCACCCCA | + | 7.67 | SP1 | MA0079.4 | chr1:43390079-43390094 | CTGGCCCCGCCCATC | + | 6.12 | SP4 | MA0685.1 | chr1:43390079-43390096 | CTGGCCCCGCCCATCCC | + | 6.09 |
|
| Number of super-enhancer constituents: 41 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43388635-43391497 | Aorta | SE_02447 | chr1:43389450-43390841 | Astrocytes | SE_04284 | chr1:43388072-43391724 | Brain_Anterior_Caudate | SE_05390 | chr1:43388151-43391958 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43388025-43393974 | Brain_Hippocampus_Middle | SE_07319 | chr1:43388405-43391978 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43388143-43392030 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43388647-43391690 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43389360-43391291 | CD3 | SE_13825 | chr1:43389164-43391654 | CD34_Primary_RO01536 | SE_14471 | chr1:43388393-43391813 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43389279-43391506 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43388655-43391579 | CD56 | SE_20799 | chr1:43388221-43391924 | CD8_Memory_7pool | SE_22754 | chr1:43388539-43391966 | CD8_primiary | SE_23189 | chr1:43390022-43390921 | Colon_Crypt_1 | SE_23904 | chr1:43389578-43390870 | Colon_Crypt_2 | SE_25177 | chr1:43389684-43390966 | Colon_Crypt_3 | SE_26580 | chr1:43388388-43391637 | Esophagus | SE_29267 | chr1:43388900-43391396 | Fetal_Intestine_Large | SE_31882 | chr1:43389453-43391047 | Gastric | SE_34353 | chr1:43388462-43391906 | HCT-116 | SE_35049 | chr1:43389580-43391635 | HeLa | SE_36013 | chr1:43388162-43389473 | HMEC | SE_37191 | chr1:43388684-43391074 | HSMMtube | SE_39883 | chr1:43388409-43391939 | K562 | SE_41620 | chr1:43389610-43390885 | LNCaP | SE_42796 | chr1:43389383-43391496 | Lung | SE_50202 | chr1:43388739-43391601 | Sigmoid_Colon | SE_54088 | chr1:43388672-43391178 | Spleen | SE_55340 | chr1:43389444-43391203 | Thymus | SE_55821 | chr1:43388031-43391835 | u87 | SE_57045 | chr1:43388803-43391033 | VACO_400 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43389426-43390586 | HSMM | SE_64340 | chr1:43389562-43390582 | NHEK | SE_67781 | chr1:43388031-43391835 | u87 | SE_68708 | chr1:43389555-43391604 | H9 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I042922 | chr1 | 43388264 | 43388369 | GH01I042923 | chr1 | 43388473 | 43392374 |
|
Enhancer Sequence | AAGATCCCTG GGAATTCACA GAAACCTTGG GGGTGATTAC CAGACTTTCT GAAACATTTG 60 GAAGGGGGAA GATGATGTAA CTCCAGCCGA TATCTGCATT ACAATATATA TTATTTCATT 120 TTAATATTAC AACAGAAAAG AAACAGAAGA TCAGAAAGGT GAAGTGACTT GCCCAAGATT 180 ATTCAGCTAA ATAGCAGTGC AGGAATCTTA AATCAGCTAT TTCTGACTCC AGAAACCATA 240 TTTTTTCCAA GACCCAGCAC AACTGAGGAG AAAACGTGGC AACAAGTGTG TACTCAGTTA 300 GGTAATGGTT CAAAGAATTG AGCAAATGCT TCATAGAGAA AGTGACAGCT AATTTGGTAT 360 TTTGATATCA GATAATCTTA TGGAGAGACC AAAGGCAGAC CAGGAGAAAG GGGATTGAAC 420 AAAAAGTTTT AGGGTGAGGA GTTGTCCTGG GAACATAGAG TACATCAAGC TTCACTGGAG 480 ATTAGGGTGT GGAAGGAGTG TATTGGAAGA TAAGGTCTGC AAAGGCCAGA ATGTGGTTAA 540 GGAATTTGGG CTTTATCATG AGAAAGTGGG GAGTATTAAC CCACAGAATA ATGTGGTCAG 600 AACACATTTT TAGGAAGATC ATTTGGGAAG CCAGGGTCAG GGTTACCAGA TGGATTTGTT 660 GTAGTAGGAC CAGTCAAGGG TTCCCTCCAA AGCAACGTAG TATCTCTGAA ACCCTGAAAG 720 TGTGAGGTTA AACCCTGCCC TGATCAAAAT GTTCACAAAA CAGCCACTAG TTGGCAGGAA 780 TGTGCCAATG AATGGATGAG CCAGACTCCC AACTAGCAGC TTCTGTTCTC TCACTCCTTG 840 AGCTGTGGTG GGGTGTGATC ACCTAGTGGA TAACAGGAGT AGGTGGGAGG GCAGTCTCTT 900 CGGAGGAAAC TTCAGAGGCC CAGAGGAGAA GGAGAACGTG ATCAGAGAAC AGAGTGGATG 960 GATGGCTGGA GGATAGGGTT GGGGTTGAGT GGGGGCAGTG GTGAGGTCGA GAGCTTGATC 1020 ATGAATGACT TGAATTTTCA GGTTAAGAAA CACAGACATT ATCCTGAGAG AAATGAGGAA 1080 CCCAGGAAGG TTTTTAAGTA GGAGAGAGAC ATAACTAGAT TTGAATTTTA GGAAGATCAT 1140 CGATTGCAGT GTGGAGAATG AGGAGGAAGC AGGAAGCACA GAGATCAGTG AGAAGGCAGT 1200 TGCAGTGATC CTGGGAGAGG TGATGAGTGG CCAGCAGTAG GCCCAGCAAT TGCAATGGAC 1260 AGACGGACCA GAACTGTAGG AGACTTATGA AATAAAAATC ACAGAATGAA AAAGGGGTCA 1320 TTAAAAATGT AGTTGACAGA AAAGAATGAT ATCCTTTCCC TATTATTAAA TACATCCTGA 1380 ATTGTCAGAT CGTCTACCTA AAATTGCACT GTAAGAATTC AGATTTCAGA ACTTCTTGGC 1440 TTCTAAATTC TACTTCATTC ATTCAATAAT CCTGACCAGA GTCTGTGGTG GGAAGTGGGG 1500 ACCAAGGAAT GGCTCAGTCC TGTTCCTGCG GCAGCTGCCC TACCCCCCCA ACCCCCGCCC 1560 TCGTCCCCGC CCCCGCCCCC AATGTGGTGG AAAGACACTC AATTCCGGTA CAGCGTGGAG 1620 AGCGCTTTGA TGGAGGAAAT ACAAGCCGAT GTAGTGTTCC CGGGAAAACC TGATCCAGAA 1680 GGCTTCCAGG GAGAGGAGAT TTTGCGCCTA AGATTTCAAA TGAAAGATCT CATAACACTG 1740 TCAGTGAAAC AACTAAGCAC TGCTGGGAAA AGATGGTGGC CTGGAGAACA GTCCCGTTAT 1800 CTATTTACCC CTTTTCGTCA GAAACCGTAG ACGTCACCTT ACGCGGGATA GGAACCCGGG 1860 TGAGCTACGT CCCCAGGGAT GCCCAGCGAT ACACAAGTCA CCGTCACCCC CTCCAGAGTA 1920 AACCGCATCG CCTGGCAAGC AGGCGCCCAG GTCGTCCCCA AGGGCCAGCG CCTGGAACCG 1980 CCAGGGTGTG ATTGGTGGAG TCTTGGAGCC CGCCCCTCGT CGGGCCCAAC AATGCGCCTC 2040 TGATTGGTGG AGAAACCACC TGGCCCCGCC CATCCCCAAT CGTGTCCGTG CGCCGCCGGT 2100 GGCCCGGCTT AGGGGACCGC TGTGAGGTCT GGAGAGGATG CGCCATCGAC CCCGGCAGTA 2160 GGCGGCCGAA CCTTGGCCCC AAATCTTCTA CCCCGGGGTG GATTGCGGCC CCTAGAGGAA 2220 AGGCGTCAGG GGACCGACCG GCAGCTGTGC CGTCGCGGCA CTCTGGACCA CGCTGAGGGC 2280 GGGCCGGCTT CCCTGCGCCT GCGCTGACAT TTTGCAGTTT GGGAAATGGC GGTGCTCGGG 2340 GACGTCGATA CTGACCCAGG GCGGGAGGCA GCTGCGAGTG GATTGTCGGG CCTTTTCAGA 2400 CCGGGGTCTG AACCTCTGGG CCGGGGCGGG GCTCGGGTGC TGCCTGGCTC TGCCAACGTT 2460 CTGGGCCCTC GAGTGTGAAT GAGCTCCGCC CGCCATCCGC CTTGTAGTCC TCGCGTCCGG 2520 CCACCGGCGC GGGGCTCCCA CCCATCCCCA CCCCACCCCA CCCCACCCCA CCCCGTCTGT 2580 TTCCTTTCTG GTCCAGTGGG GACAGCCCTG AGTGAGCAGC GTCGTAGGAG TAAGATACCT 2640 GGGCCCCCGG CCTCTCCTTC TTGCCCTGCC CCCGCACCCC CTCCCGCACG GGGACCCGGA 2700 TAACTCCTTT CAACAGAAGT CTTTTGGGAG CACACGATAA GGCTTCCTTT CATCTGGCCT 2760 CAGCCCTTCA CCAGTTAACC GCCCTGTCCC CAGGCTCAGG CAGGGCATAT TCTTCGCAAC 2820 CTGCTCTTCT TTGTTGAGAT GCAGATGGAT GTCCTCATAG ATTCTTTATA CCTAATGGTA 2880 ATACATATAG GTATTTCCAT TTGCTAAGTA CCAGTTTTCC TTTCTCACAC CCTTCTTACA 2940 ACCCCTCTTC ATGTCAGGGA GAAAAAAGCC TGCCTGTAGT TACAAAAGCA AACTTCTCCC 3000 AGATTTTGTC AGCTGAGCCT CTAGAGACAA 3030
|