| Tag | Content |
|---|
EnhancerAtlas ID | HS122-00187 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr1:25875190-25877910 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ETV6 | MA0645.1 | chr1:25877427-25877437 | AGCGGAAGTG | + | 6.02 | | KLF4 | MA0039.3 | chr1:25876312-25876323 | GGAGGGTGTGG | - | 6.32 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_02010 | chr1:25875060-25879910 | Aorta | | SE_03472 | chr1:25876169-25876665 | Brain_Angular_Gyrus | | SE_04384 | chr1:25875509-25878227 | Brain_Anterior_Caudate | | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | | SE_06990 | chr1:25875392-25877046 | Brain_Hippocampus_Middle_150 | | SE_08141 | chr1:25875552-25880283 | Brain_Inferior_Temporal_Lobe | | SE_15269 | chr1:25874020-25879614 | CD4_Memory_Primary_7pool | | SE_16249 | chr1:25875203-25877364 | CD4_Naive_Primary_7pool | | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_24457 | chr1:25875258-25875556 | Colon_Crypt_2 | | SE_24457 | chr1:25875584-25877457 | Colon_Crypt_2 | | SE_53664 | chr1:25874991-25896829 | Spleen | | SE_55600 | chr1:25876051-25876946 | Thymus | | SE_65397 | chr1:25875239-25877712 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 25875227 | 25877800 | | chr1 | 25875728 | 25875887 | | chr1 | 25875913 | 25876642 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I025547 | chr1 | 25874360 | 25877970 |
|
Enhancer Sequence | GTCTCACTCT ATTGCCCAGG CTGGAATGCA GTGATATGAT CATAGCTTAC TGCAGCCTCG 60
ACCTCCTGGG CTCAAGGGAT CCTCCTGGGT AGCTAGAACT ACAGGTGCAC ACTGCCACGC 120
CCAGCTAATT ATTTTTTGTA GAGACGAGGT CTTACCATGT TGTCCAGGCT GGTCTTGAAC 180
TCCTGGCCTC AAGCAATCCT TCCTTCTCAG CCTCCTAGCA CACTGGAATT ACAGGCATGA 240
GCCACTGTGC CTGTCTTGTC CCTGTTTTAA AGTTAGGACA CTGAGATCCA GGGAGGTTCA 300
GTGACTATGA ACTCCACAGC CCATAGCATA TTTTTCTCTT ACTGTGTAAG TAGGTACTTA 360
GGAAATGGTA GCTGCTGCAA TTTGTCATTT TAAAAATTAT TTTCTTTTGA TAACAATCTC 420
AACAGCTTTG ACTTCTGAAA TTTTCCTAGT ACTTTTCACG TCCAGAAACT TCTGGTGACG 480
CTCCTGAGGG GATGAACCCA TTTGTCAGAT AGAATTACAG CCCAGAGAAG CAGCTACACT 540
CCAGGTCAGG GCAGAGCTTG AGCCCTCTTC TGAGATGTTG TCACTCTGGC CTCTGAGGCC 600
ATCTCCCCAC CAGGCTGGGG GAGGCTGGAG GCCAGAGCCC CGGTTGGAGG CTCCCCTGGC 660
CCCTGGGTTT GGCTGCAGCT CTGATGTTGC AGACACACCA GCCAGGCAGG GTCTCTGGGA 720
GCAGCAGAAC GGGCACAAGG GCATTCAGCC CAGCTCTGAC TCCCGGGTGG TTGGGGGACC 780
TTAACAAGGA AAGAACACGT GTTCACAGCT GTAATTTAGA CCTTAGACCA GGCATATGGT 840
CTGTCCCCAG CTAACTCCAG CAGCAGGTCA TCTGTAAAAT TGCAACGTTA AAATAGCGCA 900
GTCATTACCC ACTACAGGGC CAAAAATAAC TAGGACCGGA ACAGGGCTGT GCACTCAGGC 960
CTGTATTTGC CCAGGGGCCT CTGGGAGCAC CTCCTGAAGC CGTGGGCTCC TCCCGGCAAT 1020
AAGGCCTCCG GCTGTGGCTG GCGAGTAGGG CGGGTGGCGG GTGTGGCCCT GAGCCCTACC 1080
AATGGGCCTT CACTGAGAGC TCCCAGGTGC TGGTTTCTGT GGGGAGGGTG TGGGCATGAG 1140
GGGCCTTACG CTCTAGTGAA GACATGAGTC ATGTGCACAG ACCACAGGAG GGAAGCAGCT 1200
TCCTAGAGAG AAAGGAGCAT CTCAGTGGGG CCTGGGAACA TGGGGTACAA GGGAGAAACA 1260
GGACCAGACT GGACGGCCAC ATTGGGCAGG CGCACGCTTC CATGCCAGGT CCTGGGGAAG 1320
CAGACATGAA TGGCAGGTAC TTTAAAGGGA AGAGACGTGT AGGCAGTGCT TGGCAGTGGG 1380
TGGTGTGGCT GCAGGAGGAA GAAGAGATTT ACAGTCAAGA AAGGCACCAA CAGCCCGCCC 1440
ACAGGAGGGA TGAGGCCCCA CTGGAAGGTG TACTGAGCAA CTGCGATGGG CCTGCCTCTC 1500
TGCTAAATTC TATAAACTTA TCCAAGGGTC ACAACAGCCC CCAGGAGTCA GAGCTGTTGT 1560
TTCCCCCATT TTAAAGATGA AAAACTGAGG TTCAGGGAGG GTAATGAGCT CACTCAAGAT 1620
GACTCAGACA TGAAGCATTG GAGCTGATAT CTTAGGATTA AGGCCTTGCT GTTAACCACG 1680
AGGCTATATT GCCTCAAAGG AGGCTTCCTG GAAGAGGTTG GATGTGTGGG GTTTGATCAA 1740
GTGAAGAAAG GGCATTTAGG ATAGAGGGAA CTACTTGAGC AAAGGCAAAG AAGTTAGACA 1800
GTAAATATTA CATTATTAGG AAGAAGCTCT GCATGGTTGG AGCTTCTTGG GGTAGGGGGT 1860
ATGTAGGGAT ATTGTGGGAG AAGAGACGGG GAAACTTAAA ATTCCCTCAC AGTCACTGGT 1920
CATTGTGGGG ATTGTCTATA GTGGACTGGG TGGGGTGAGG AGAGTCCCTC TGACTTGCCA 1980
TGTTACCTTG CACAGGTCCC ATCCCTGTCT GGGCTTCAGT TGTATCATCA AGTGAGGGGC 2040
TTGAGCTGAG GGCCTAAGGC TGATGAGTGG CAACCAGTCT GTAAGGACGT GGTTAGAGGA 2100
GGGGAAGGGT CAGGCCAGGG AAGGAGGAAT GCAGAAAAAT GCTGAACATT TCAGGGGTCA 2160
GGGAGGACTA GGGAATGTTT TGACAGCAGA GAGATCACCA GTGACCTTGG CAGGCTTTGG 2220
TTCTTTGGAA TGGAGGGAGC GGAAGTGACT TTGGAAAGGG GCCAGGAAAG GGCTGAACCA 2280
GAGGAAATGG GAGAATGGGG ACATGAAAAT GGGGGCTGGA GAGGGAGAGT GGAGAATGTT 2340
TGCCAGGGGT AGGGATGGAT AATGAGATGT TCAAACCTTG ATCAATTAGT ATTGCTTGCC 2400
TGGGGCCTTG TGCTGAGAAA GGATCAGAGG GAAGTAGAGC TGCAATTGAT TATCAATGTC 2460
TGCCAAGGGT GCGGGTCATA GGCACAGTAG CACTTCTTTC CATTGCTGTC CTTGCTTAGA 2520
TGGGTCTCAG GTTGAAATTG GTGGCCTGGG TATCCTAGCC TGCAGAGGGG AAGCCTTAGG 2580
TATTAGGAAT ACCTAATTCC AGGTGAGAAG AAATGCCTCC GCCTCCAAAA ACCTGATCTT 2640
TTGCTAGAAT TAAGGTAGTT TGCTGCATGA TAAAGTAGTA TGGTCTCATG GTCAGGAGCT 2700
TGGGCTTTAG AGTCAGTCCT 2720
|
