Tag | Content |
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EnhancerAtlas ID | HS122-00099 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr1:17239310-17241980 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr1:17239982-17239998 | GAGGTCCAAGTCCAGT | + | 6.07 | KLF5 | MA0599.1 | chr1:17240495-17240505 | GCCCCGCCCC | + | 6.02 |
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| Number of super-enhancer constituents: 68 | ID | Coordinate | Tissue/cell |
SE_01476 | chr1:17239966-17242069 | Adrenal_Gland | SE_02875 | chr1:17240618-17241434 | Astrocytes | SE_03430 | chr1:17238100-17239778 | Brain_Angular_Gyrus | SE_03430 | chr1:17239783-17240499 | Brain_Angular_Gyrus | SE_03430 | chr1:17240731-17242488 | Brain_Angular_Gyrus | SE_04111 | chr1:17237927-17240527 | Brain_Anterior_Caudate | SE_04111 | chr1:17240628-17242448 | Brain_Anterior_Caudate | SE_05172 | chr1:17237770-17246094 | Brain_Cingulate_Gyrus | SE_06210 | chr1:17237645-17245771 | Brain_Hippocampus_Middle | SE_07232 | chr1:17238080-17242647 | Brain_Hippocampus_Middle_150 | SE_08076 | chr1:17237896-17246252 | Brain_Inferior_Temporal_Lobe | SE_08889 | chr1:17238819-17239676 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17239947-17240454 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17240789-17242026 | Brain_Mid_Frontal_Lobe | SE_10448 | chr1:17239853-17240476 | CD19_Primary | SE_11024 | chr1:17237883-17245307 | CD20 | SE_12131 | chr1:17240859-17241779 | CD3 | SE_13570 | chr1:17240617-17241484 | CD34_Primary_RO01536 | SE_14531 | chr1:17239563-17241985 | CD4_Memory_Primary_7pool | SE_15440 | chr1:17239829-17241939 | CD4_Memory_Primary_8pool | SE_15839 | chr1:17240568-17241687 | CD4_Naive_Primary_7pool | SE_16401 | chr1:17239578-17241745 | CD4_Naive_Primary_8pool | SE_17223 | chr1:17239936-17240632 | CD4p_CD225int_CD127p_Tmem | SE_17223 | chr1:17240641-17241519 | CD4p_CD225int_CD127p_Tmem | SE_17702 | chr1:17238954-17242280 | CD4p_CD25-_CD45RAp_Naive | SE_18224 | chr1:17239283-17242338 | CD4p_CD25-_CD45ROp_Memory | SE_19865 | chr1:17239824-17242024 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20182 | chr1:17239788-17241910 | CD56 | SE_20877 | chr1:17239477-17241855 | CD8_Memory_7pool | SE_21501 | chr1:17239632-17241900 | CD8_Naive_7pool | SE_22012 | chr1:17239593-17241877 | CD8_Naive_8pool | SE_22656 | chr1:17239909-17240454 | CD8_primiary | SE_22656 | chr1:17240604-17241913 | CD8_primiary | SE_23911 | chr1:17239885-17240478 | Colon_Crypt_2 | SE_23911 | chr1:17240479-17241564 | Colon_Crypt_2 | SE_25305 | chr1:17239947-17241454 | Colon_Crypt_3 | SE_27153 | chr1:17239835-17242028 | Esophagus | SE_28353 | chr1:17239867-17240494 | Fetal_Intestine | SE_28353 | chr1:17240610-17241704 | Fetal_Intestine | SE_29508 | chr1:17239703-17240542 | Fetal_Intestine_Large | SE_29649 | chr1:17238840-17240515 | Fetal_Muscle | SE_29649 | chr1:17240656-17242112 | Fetal_Muscle | SE_31118 | chr1:17238627-17240491 | Fetal_Thymus | SE_31118 | chr1:17240712-17241947 | Fetal_Thymus | SE_31881 | chr1:17239819-17242135 | Gastric | SE_33013 | chr1:17239950-17240437 | H1 | SE_33013 | chr1:17240620-17241403 | H1 | SE_33540 | chr1:17239257-17245174 | H2171 | SE_35172 | chr1:17239807-17241711 | HeLa | SE_42843 | chr1:17239864-17243201 | Lung | SE_45444 | chr1:17239949-17240367 | NHLF | SE_47744 | chr1:17239961-17240545 | Pancreas | SE_47744 | chr1:17240549-17242006 | Pancreas | SE_51608 | chr1:17238813-17242145 | Skeletal_Muscle | SE_53155 | chr1:17238762-17240528 | Small_Intestine | SE_53155 | chr1:17240572-17241791 | Small_Intestine | SE_53544 | chr1:17238838-17241941 | Spleen | SE_54964 | chr1:17238808-17242458 | Stomach_Smooth_Muscle | SE_55554 | chr1:17240073-17240473 | Thymus | SE_55554 | chr1:17240575-17241458 | Thymus | SE_61917 | chr1:17221528-17256732 | Toledo | SE_63124 | chr1:17215209-17241689 | Tonsil | SE_63250 | chr1:17222916-17254487 | GLC16 | SE_63321 | chr1:17222804-17249569 | NCI-H82 | SE_65449 | chr1:17237943-17242529 | Pancreatic_islets | SE_67642 | chr1:17239816-17240437 | u87 | SE_67642 | chr1:17240556-17241577 | u87 | SE_68996 | chr1:17239943-17241712 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 17239897 | 17240265 | chr1 | 17239430 | 17239585 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I016912 | chr1 | 17238896 | 17241927 |
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Enhancer Sequence | ACCCCAAATC CCAGGGAATG GCCCGAATCT CTCCTGACAA ACAGCTCTCA GCCCTGGTCC 60 AGGCCACAGT CTTGCTTGCA CCGGGCCGGG TTTCAGAGCC CGAAGGGCAC ACTGGCAGCC 120 TTTAGTGCAG TGTTTCAGAT GTCACAGACA GGTTCCTCTT TGACGAAGAT GGAACTTCCA 180 CTGCTTCCCT CCTACCACGC AGGAAACACA GAAGCAACCA TCAGCCGAGG GCCTGCTGGC 240 CGTTCTCTCT GGGTACTGTG TTTGGAAAAA GCACAAAATC ATTAACTTAA ACATGCTTTT 300 TCAAACCAAA CACATCCCTC TCTTAGCCCT GGAGATTCAG AGCTGCCTCT CCCTTTGAAA 360 ATGAATGATC TCGCCCGGGT GCAGTGGCTC ACGCCTGTAC TCCCAGTACT TTGGGAAGCT 420 GAGGCGGGTG GATCGCGAGG TCAGCAGTTT GAGACCAGCC TGGCCAATAT GGTGAAACCC 480 CGTCTCTACT GAAAATACAA AAATTAGCCG AGCGTGGCGG CGGGCGCCTG TAGTCCAAGC 540 TACTCAGGAG GCTGGGGCAG AGGTTGCGTT TAGCCAAGAT CATGCCACTG CACTCCAGCC 600 TGGGCAATAG AGCAAGACTC CCTCAAAAAA AAAAAAAAGC ATGATTTCAT CCAATGCCTT 660 CAATAACAGA AGGAGGTCCA AGTCCAGTGA GAGGGTGGAA CGAACATACT GTCACAGTGG 720 AAAGGACACG AGACAGGCGC GCCACCGGGT TGAGTCTCGC GAACAAACTG AGGCCAGAGT 780 GCCTTCCCCA GGGCTGCACG TCAGTCAGGA AAAAAAAAAG CATTCTCTCC GACAGGTCAA 840 ATCACCGAAG CCTCGGGATC GTCGCTGGGG GCTGTGACGG GGCTGGCATG AAACGTCCCT 900 CTGTCTGGCT GGGCGATGGG TCAGTGCTCA GGAGTTTCAG GCCTTTAAGG CCCGGCCAGA 960 CCGCAGGGGG ACTCTGCAGC CGGGTCGGGG TTTCGATCCT GCGCTGCGGC CTTGCAACTG 1020 CGAGGACTTG GGGGTCGTGC TTCGTTCGCC TGGTATCCTC GTTCGTGCGT GTAGGAGGCG 1080 CCTGGCTTGC CGGGCGGTGC CAGGCGGCAA GAGGGAGGGC GCACGGAGCG TGTCCGCCCA 1140 GGGCGGCCCC TGTAAGCGCT GCAGAAGCGC TGCTCCCGGC GCCCGGCCCC GCCCCAGCCT 1200 CCGCCCCACT ACCGCGCAGC GCAGGCTCCG CCCCCAGTTT TCCCCGCCCC GTGGCGGGGA 1260 CGCCCCGCCC GGTCCGGCCC GCTCGGCCTC GGCAGCAGCG GCTGCGGCGA AGGCGCGCGA 1320 AGGTAGGTGG CCGGGGGCGC GCGCGTGCGC GGGGGCGGGA CGGACGCGCT CCCGGCGGAG 1380 GAGGCCGCGC GCCTGGGGGC GGGCTGGAGC CACGTACCGG GGCTGGGGGC GCTGTGTGTT 1440 CCGCGACTGC CGCGGCCCGG CACCGGAGGC CAGGAGAGCG TTCCCAACAG GCTCCGCGGA 1500 TGCCCCGCCG CGTCCTGCCG CCCATCCTGC CCGGATTGTC GCGGGCCGGG GGCACGACAG 1560 GAGACTGGGG CCTGCAGGGC GCAGCCGTCC CTCCGCCGGC CGGGGTCCCC TCGCTCCGCG 1620 GGCGGCCGTG GGAGGCCCTC GCGACGGCCT CTGCCCCCCG CAGATGCCCT CTGCAGCTCC 1680 TGCGTGCGGG CCCCGCCCTG CACTGCCCTC CTCGTGTGGG ATCCGGTTTC GTCTTCATTG 1740 CAGCCCTGCC GAGTCGGAAG CATCTCCATT GTGCGGATGG GGAAACTGAG GCCCAGAGCG 1800 CATAGTTGGG CTGGCCACGG AGGCAGGGCC GCCGGATGCT GTGCGGGGAT GGGGCCCTGC 1860 ACCCCTTGCG CCTCTCACCA TGCGGCCTCA GGCCTCTGTG CCCGGCAGCG TCTCTGGAGT 1920 GGGCATTTTG AACGAGCTCC CTCCTGATTT TCACACAGAC TTAAGCCTGA CGACCATGCT 1980 GGGGCGGATG TCTGCCCCTC TGGTGACCAG GTCACAGCTC CCTTGGGAAG ACGATTGACT 2040 GGGGAATGGG GACCCTGGGG AGGAGGACTT CAGGGTGCCA TCTGTCTGTT TACGCCAGAA 2100 AACAGAGATT TCTGTTTTCT TTCGCTGGGC TCACAGCAGG TGCTTAATAA ACAGATCTTG 2160 TGGCGGGAGC AGACGACAGC GAGGTTCAGG CAAGACTCCA GGAGTCAACC CCTGGATCTC 2220 GGAGGCTCCC CACCCGCGCA CATTTCCCTG ACTTAACCCT CCCCTCCCCA AGTCTTTCAG 2280 CCCTTTCCAC CCAAGTGGCC CCTGTGGGGG TCACTGCCTG GTTTTCACCC TGATCTTCTG 2340 GGATGCGGCA GATGCTGGCT GGATATGTGT TCGCTGGTGT CCTTCCGTGA TCCCCGTCTG 2400 TGGCTGACAC CATCTGTGGC CCAACATGAC CCCAGCCAGA GCCAAGGGGA ATCATTTCTT 2460 TTTCCATTTA ACATCCTATG TTATTACTTG GCTCTTAGCA TTCATTAATT CATTCAGCAG 2520 CTCTTCATGG AGCTTTGGCC TTAGCCCATG CACTGTGGAA GTGACAGTGA GCTAAGCCAA 2580 CCTGGCACTT TGGGAGGCTG AGGTGGGAGG ACCGCTTGAG CCCAGGAGTT GGAGACTAGC 2640 CTGGGCAACA TCTCATCTCT ACAACAAGTA 2670
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