Tag | Content |
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EnhancerAtlas ID | HS122-00066 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr1:11966890-11971450 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Klf12 | MA0742.1 | chr1:11971292-11971307 | GGCCACGCCCAGAAA | + | 6.14 | Nkx3-2 | MA0122.3 | chr1:11968331-11968344 | TTTAAGTGTTTTA | - | 6.33 | ZNF143 | MA0088.2 | chr1:11967995-11968011 | TACCCACAATGCATTG | + | 9.63 | ZNF143 | MA0088.2 | chr1:11970183-11970199 | CAATGCATTGTGGGTA | - | 9.63 | Zfx | MA0146.2 | chr1:11969285-11969299 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_04401 | chr1:11967802-11970392 | Brain_Anterior_Caudate | SE_05426 | chr1:11967459-11970702 | Brain_Cingulate_Gyrus | SE_06308 | chr1:11966827-11970789 | Brain_Hippocampus_Middle | SE_07453 | chr1:11967402-11970810 | Brain_Hippocampus_Middle_150 | SE_08423 | chr1:11967438-11970628 | Brain_Inferior_Temporal_Lobe | SE_10739 | chr1:11967490-11970531 | CD19_Primary | SE_13010 | chr1:11967686-11969397 | CD34_Primary_RO01480 | SE_13010 | chr1:11969509-11970356 | CD34_Primary_RO01480 | SE_13630 | chr1:11967645-11970731 | CD34_Primary_RO01536 | SE_14236 | chr1:11967710-11969205 | CD34_Primary_RO01549 | SE_14236 | chr1:11969377-11970343 | CD34_Primary_RO01549 | SE_14675 | chr1:11967367-11971255 | CD4_Memory_Primary_7pool | SE_16078 | chr1:11967699-11970381 | CD4_Naive_Primary_7pool | SE_16518 | chr1:11967714-11970388 | CD4_Naive_Primary_8pool | SE_21206 | chr1:11967365-11970416 | CD8_Memory_7pool | SE_21842 | chr1:11967413-11970668 | CD8_Naive_7pool | SE_22216 | chr1:11967346-11970790 | CD8_Naive_8pool | SE_34570 | chr1:11966817-11970548 | HCT-116 | SE_40308 | chr1:11967553-11971272 | K562 | SE_54351 | chr1:11967622-11970499 | Spleen | SE_66899 | chr1:11967081-11970418 | H2171 | SE_67244 | chr1:11967631-11970544 | MM1S | SE_67657 | chr1:11967812-11970390 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 6 | Chromosome | Start | End |
chr1 | 11969600 | 11971304 | chr1 | 11967136 | 11967313 | chr1 | 11970675 | 11971016 | chr1 | 11968510 | 11969143 | chr1 | 11967830 | 11968200 | chr1 | 11966991 | 11967756 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I011910 | chr1 | 11970721 | 11971010 |
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Enhancer Sequence | TTCCCCTGCT GTGGAATTTT TCCAGCAGTT CAGCTGCTAC AGGGCAGAGG CTGGAAAGAT 60 GGCCCTGGGA TCTTCCCAGG TGAGAAGACG GAAGGAAAGA GGGGCCAGCA AAGGAGGGGC 120 TGCAGGGGAG TGAGAGAACA GGGGTAGTGG GGGGGCCCAG GCTCCATGGA CCACGATCAC 180 TGCGGGGAGG CACCTGCACC GCTTCTCCTT CCCATCTGCA ACCAGGAGCC AGCTACCGCC 240 CCCTCCCCAT CTCCTGCCCC TCCTCACCTA CTGTTTCCTT CCTCTCTCCC AAAGTGTTGG 300 GATTACAGGC GTGAGCCACC GCGCCCGGCC AGGAAACCTC CTCTCTGCCC TCGGTTTCTG 360 TGAGGCTCCC AGTCCAGGTT TTCCTCCTGC CTCCCTCAAT TTCTCTAATC TCTTTCATAG 420 GCTCCTGCAC TGTCCCCTCC TTTTATGCCA CCATCCCCCA GGGACCTTCC TTGGCCTTTT 480 CTCTCCTCAT TTCACAGCCT TTCCCAGGCC TTCCCCTGCT CAGCCAGTAA TCTGTCTCCC 540 AAACTCCTCA CTCTCCATAT TTCAGGCACA ACAGTTGCCA ACAGAGGTTC TCAATGTGGC 600 CTCCATCAGA ATCACACGGA GGATGAGTTC AGACTCAGGG GGCTGGGCCC AATCCCCAGG 660 CCTGCAGTAG GTCTGGAGTG GCTAGAAGTG TAAGAATTTT TTTTTGGAGA CACGCTCTCG 720 TTATGTTGCC CAGGCTGGTC TTGAACCCCT AGTTCAGGCG ATCAGCCTGC CTCAGCCACC 780 CAAAGTGCTG GGATTACAAG GGTGAGCCAC GGAGTCCAGC CAAGATAATT TTTTTTTTAC 840 TTTTTTTTTT AAGTTCAAAA AAATTCTTTA CTTATTAGGC TAATTGTGCA ATTAAAAAAA 900 AAAAAAAATT GCAAAAACCG CAATTACTTT TGCACCGATC TAATAGCTCG CCCACTGTAA 960 GTAAAGCAGG TAAAGTCAGC CTTTTTCTTC TGGGACCAGA CTCTGCTCTG CCCCGCGGTG 1020 GTGGCCTCAG GCGCAGCGCT AAAACGCATG AACCATTTAA GGTATTTCCT GAAACTGGAG 1080 CGTGATTGGT GAGACTTTAT TTGCATACCC ACAATGCATT GCGCACTAAA TAATGTTCGT 1140 CTTTAAAATT ATTTCCCCTT TTTCCTTCAA CATATCTTTC TCGGAACCGA GATTGCTGTC 1200 CCAGAATTGT CTGAAGAAAA AGGCTGAAGT CAATAGCTCT TTTGGGCCGA AGGAAAGTTA 1260 CCATTACCCG TTTAGGAGTA GCCGTTACCT GAGAACTGTA GTGTCGACGA CTGATGTTAT 1320 ACTCTGGTTT CTCTTCAAAT CGTATAAATC TTTCGCCTTT TACTAAAGAT TTCCGTGGAG 1380 AGAAACGAGT GTGAGTCTGA AACCAATTTT TTGAGGCCTT GCGTTTCTTA GCAGGGCTTA 1440 TTTTAAGTGT TTTAAAAACA GATGCGATTC CGTTAAATCG CGTGTGGAGC TATGTAAAGT 1500 GTATTATAGA ACAAATGCGA GTTACGGTTT TTCAGCTTTT CGCTTTGTTA AGGTATGTGA 1560 TATCAATTGT ATTGCATTTC TGAGCAGTTA TAATATTAAG ATGTTGGGGT GGCTTACTGC 1620 TTTTGACCAA GAAGTAGGGT TTGTTGGTTG ATTACACCAG TGGTTTTTAA CCCCAGCCAC 1680 TGAGTGATGG AGGGTTACCG ACTCACAAGC GAGCATTAAC GCCTGAGGTC CGCCTGCTGT 1740 CAGGGCAGCA AGGCATCAGA TTCTCCTAGG AGCGGGAACC CTATTGTGAA CTGCGTATAC 1800 GAGGTATCTA GGTGCGTGCT CCTTTTAAGA ATCTAATGGC TGATGACGAG GGGCACAGTT 1860 TCAACCTGGA ACTGTCCACA CCCCCTACCC ACCTTCCCCC GCCCTTGGAA AAACTGCCTT 1920 CCATGAACTG GGTCCCTTGT GCCAGAAAGG TTGGGGACCG CTGGACTATC CGATCAAATG 1980 AAGCAGGGAC TCGGGGCGAG CTCCCCCGCT GCTCCCGCCG GCTTCTCCGT GTAGAATCGA 2040 AGAAGGCAGT CCCAAGGGCT CTTCTGCCCC GTATCCCCGC CTGAGGAGCG TGCCAGGCGC 2100 GCAGCTAGTC CTCCCCCGAC CCAACCGGTT TGATGAAACG CAAGAGAAAG TGAATTTTCC 2160 AGCCACTCCC ATTGGCCAGA ATTCGTCTCA GCCGCAAGGG AGGCTGGGAA GTGCAGTCAT 2220 GCCTTCAGGT AGCCGTGAGC CCTGCTAGCG ATAGGAGATT CTAGAGAGAG GTTGAGTACT 2280 GGGGAGGAAA AACTAGCAGG GTCTGTCCCA GTAAAGGAGG GAGGAAATCC ATCGCAAAAA 2340 ATCCTGACCC CCAGGCCGGG CGCGGTGGCT CACGCCTGTA ATCCCAGCAC TTTGGGAGGC 2400 CGAGGCGGGC GGATCACCTG CGGATCACCT GAGGTCAGGA GTTCGAGACT GGCCTGGCCA 2460 ACATGGAGAA ACCCCGTCTC TACTAAAAAT ACAAAAATTA GCCGGGCAGG AGGGCGCATG 2520 CCTGTAATCA CAGCCACTCG GGAGGCTGAG GCAGGAGAAT CGCTTGAACC TGGAAGGCGG 2580 AGGTTGCAGT GAACCGAGAT CGCGCCACTG CACTCGATCC TGAGCGACAG AGCGAGACTC 2640 TGTCTCAAAA AAAAAAAAAA AAAAAAAAAA AAATCTACCC CGGGCTCAGG CCCTGAAGCA 2700 GCCGCCCACA GCCCAGCCCC GCCGTGCCCC GCCGTGCCCC GCCGTGCCCC GCCGTGCCCC 2760 GCCATGCGAC TCAAAGCCCC ATTCAAGCTA CGTAGGAGGG TAAATTGTCC TTTTCCCCCA 2820 AGGCCAGCTG CTCCTCCAGA AGCCAGCTCT GGTCCTTCAG ACTCAAATAC TAGGGAACAA 2880 TGTTTTCTCT GAGTTTTGAG TGTGTTTCTT GTTTCAGAGT AAATACGAAC CGTCGTAATG 2940 GCTAAGGGCA TCTACTTTTA AAACGCTCAA ATAAGCCTTG CTAAAAAATG CAAGACCTCT 3000 AAAAAATTGG TTTAAAACTC AGAATTATTC CTCTCCACGG AAATCTTTAG TAAAAGGCGA 3060 AAGATTTATG CGATATGAAG AGAAACTAGA GTAAGAACTT CGATGAGTGG CACTCAGTTC 3120 TCAGGTAATG GCTACTCCCA ACAGGCTAAT GGTAAATTTC TTTCTGCCCA AAAGAGCTAT 3180 TGACTTCTGC CTTTTTCTTC AGACAATTCT GGAACAGCAA TCTCAGTTTC AGGAAAGATA 3240 GATTGAAGGA AAAAGGGGAC TAGTAATTTT AAAGACGAAA ATTATTTGGT GCACAATGCA 3300 TTGTGGGTAT GCAAATAAAG TCTCAGCAAT CAAGCTCCAA TTTTGACAAA CTGGTGAAGC 3360 CTTAGGGACT CCTCAAAAAA AGGTTTTCTG TTGCTTTTGT TTTGTCTTAA ATTTCTGATT 3420 TTTAATGTTT GTGGGTACAT AGCATGTGTA TGTATGGGTT ACATGACAAG AGAAAGGTTT 3480 TGTTTGTTTG AGATGGAGTC TTGCTCTTGT CACCCAGGCT GGAGTGCTGT GGTGCGATCT 3540 CAGCTCACTG CAACCTCCGC CTCCTGGGTT CAAGCGATTC TCCTGCCTCA GCTTCCCGAG 3600 TAGCTGGGAT TACAGGTGTG AGCCACCATG CCCGGCTAAT TTTTGTATTT TTAGTAGAGA 3660 TGGGGTTTCA CCATGTTGGC CAGGCTGGTC TCGAACTCCT GACCTAAGGT GATCCGCCTG 3720 CCTCGGCCTC CCAAAGTGCT GGGATTACAG GCGTGAGCTA CTGCGCCCGG CCCCTGCGAA 3780 TGCTGTGTAG TTGTCTCTTC CCAAGGTTTT ATTCTGAGAG GAGCCCCAGC CTTTCTCACG 3840 AGCTCACTTG CCCAGTGTTG CCGTCTCCCA GGACAGCCAC AGAGCAGTCA CACTGGTCCC 3900 TGGCCCGGGT TTTCAGAGCT CTCCTCCACG TGTGTGTTAG GGTTCTCTAG AGGGACAGGA 3960 CCAATAGGAT CTACGTATAT ATGAGAGGGA CTTTATTAAG GAGAATTGAC TCACACGATC 4020 ACAAGGTCAA GTCCCATGAT AAGCCGCCTG CAAGTTGAGG ATCAAGGAAG CCAGCAGTGG 4080 CTCAGTCCAG GTCCCAAAAC CTCAAAAGTA GGCAAGCTGA CAGTGCAGCC TTCAATCTGT 4140 GGCTGAAGGC CTGAGAGCCC CCAGCAAACC ACTGGTGTAA GTCCAAGAGT CCAAAAGCTG 4200 AAGAACTTGG AGTCTGATGT TCAAGGGCAG GAAGCCTCCA GCACGGGAGA AAGATGAAGC 4260 CCGGAGGACC CGGCAAGTCG GCTTTTTCCA CCTTCTTCTG CCTGCTTTTT CTAGCTGTGC 4320 TGGCAGCCGA CTGGATGGTG CCCCCGACAC TGTGAGTGGG TCTTCCTGTC CCAGTCCACT 4380 GACTCAAGTG TTAATCTATT CTGGCCACGC CCAGAAACAT CCAGATACAC CCAGAAACAA 4440 TACTTTGCAT CCTTTGATGC AATCAAGTTG ACACTGTTTT TTTGGTTTTT TTTTTTTTTT 4500 TTTTTTTTGA GATGAAGTTT CTCTCTGTCA CCCAGGCTGG AGTGCAATGG CACGATCTCG 4560
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