Tag | Content |
---|
EnhancerAtlas ID | HS122-00027 |
Organism | Homo sapiens |
Tissue/cell | LoVo |
Coordinate | chr1:8099700-8101780 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ALX3 | MA0634.1 | chr1:8099849-8099859 | TCTAATTAAA | + | 6.02 | IRF1 | MA0050.2 | chr1:8101175-8101196 | TCTTTCTTTCTTTTTTTGTTT | + | 6.13 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_01874 | chr1:8099666-8101052 | Aorta | SE_26425 | chr1:8099767-8101609 | Duodenum_Smooth_Muscle | SE_33765 | chr1:8099879-8101573 | HCC1954 | SE_34231 | chr1:8099554-8102426 | HCT-116 | SE_34846 | chr1:8099891-8101213 | HeLa | SE_36931 | chr1:8099699-8101977 | HSMMtube | SE_45858 | chr1:8099933-8101698 | Osteoblasts | SE_47106 | chr1:8099395-8101831 | Panc1 | SE_51696 | chr1:8100193-8101440 | Skeletal_Muscle_Myoblast | SE_52775 | chr1:8100403-8100987 | Small_Intestine | SE_54897 | chr1:8099700-8101657 | Stomach_Smooth_Muscle | SE_55872 | chr1:8098984-8102769 | u87 | SE_63484 | chr1:8100182-8101259 | HSMM | SE_67534 | chr1:8098984-8102769 | u87 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I008039 | chr1 | 8099908 | 8101624 |
|
Enhancer Sequence | ATGTCGCTGC ACACATTGCT TTGTTCACAT GTTCAGATGA CATCATGCAG GGCAAGACTT 60 TCTCTAACTT TTGGCTTTAT CCATGTTTGT GTTGACTTCA TTTTGAGGTT CCTTGGTGGC 120 ATGATGGCTG CCAGCAAACC CTGGGATCAT CTAATTAAAA ATTTTAAAAA CAACTTATTT 180 AATAGTTTGA ACAAAAACCC TGGGCCTGAT TCTCACAAAT CGAAACTGAA GGCCAGGGGA 240 GTGCAATGTT CCAATTGGCC AAGCCTGAAT GTGGGACCTC ATTTGGAACC ATGGGGGGAG 300 AATCAAATCC ATCTGAGGCT CAAGTGCAGA GGAGGACCAA GAGTAGAGGA GGACTAAGAG 360 TAGAGGAGGT GATAGCTTCC CAGAGTAAGA CTGAAGAATG GACTAGGAAA AAAAGGAAAT 420 GGATATTGTC AGCATACATC AAGTGTCCAC AACAGCCATT TTCTTATGTA CAGCATTTGA 480 CTCTGTTCAC TTACAAATTT CTTAAAGTTT TCTGTTCTTT GACCTCGGTA ACACTACACG 540 TCACACCTTT TGATACCTCT CCTCAGTCCT GCTCGGTCAT TTATTCTTCT CTTCCTTGTA 600 TGCTTAGATG TTGGCGTCTT CGAGGCTTTC TTTACTTATT CCTTAGTTTA GTCATCTCAT 660 TCTATTCCTG AGCTTTTATT ATGATGTCTA TGTAAATTAC ACCAAAATCT AATTGTAGTC 720 CCATTTTCTC TCCTGGCCTG TAGTCCCTTT TTTTTTTTTC TCCTGGCCTT TAATCCCATA 780 TTTTTAATTT CTTACCAGTG CATCTCTCCT GGATATTTGT TGCAGACTGG CTTCTTGGCA 840 AGCAGTCTTT GAGATGGAGA TGAACATGGA GGACATTTAT TAGAGTGTTG AAGGAAGGGT 900 GAGGAAAAAG AATTGGGCAG AGGGAGAAGT TAAGTTGTGA TCCATGTACG ACATAGGCCT 960 TAGCTAACTA CATGCAAAGC TCTGGAACAG GATTGACCCT TTGGAGTTGT CCTAACTTGG 1020 GCAAGAGAGC TGGACCTTTT TTCCTCTAAC TCTTATTGGT CAGTCATTGA TATGGCTTGC 1080 CTTTGGAAGG AAGAGTAAGC TTGGAAAAGG CAGTTTTCTT CAGCTGAGTC ACTCTCCAAA 1140 CAGGGTTGAC AGCTAAGGGC CATGTTCTGG CAGCATTCCC AGGAGCTTGA GGAATAAGGC 1200 TTTTCATAAC TCATTGGGGA TCTGGGTAGC TCATCATGGA AACTTCCTTT TGTTCTCTCT 1260 GTTGTTAGTT TATCCTTCCT CACTCCATTT TCCTAGTAGT TTTGTTGATG TTTCTACTTT 1320 GATATTTTGA GGCTATATTA TTCAGAGCAT ACATGTTTAG AATTGTTAAA TCTGTCTGAT 1380 AAATCCAACA TTTTGTTAAT TTGTAGTAAG CCTCTATCTC TAGTAATAAT TTTTGCATTA 1440 AAGTCTATTT TGTTTGATAC TTCTTTTCTT TACTTTCTTT CTTTCTTTTT TTGTTTTGTC 1500 TTGTTTTGTT TTGGGACAAA GTCTCACTCT GTGGCTTAGG CTGGACTGCA GTGGCATGAT 1560 CTTAGCTCAC TGTAACCTAT ACCTCCTGGG TTTAAGCGAT TCTTGTGTCT CAGCCATCTG 1620 AGTATCTGGG ATTACAGGTG TGTGCCACCA TGCCCAGCTA ATTTTTTGTA TTTTTAGTAG 1680 AGACAGAGTT TTGCCATGTT GGCCAGGCTG GTCTCAAACT CCTGGTCTTG AGTGATCTGC 1740 TTGCCTCAGC CTCCCAAAGT GATGGGATTA TAGGCGTGAG AGACCACGCC TGGCCTGTTT 1800 GATATTTCTG GAGTCACAAT GGCTTTCTTT TGGTTAGTAC TTTGGTGTAT TTTTTTCTAA 1860 AATTTTCTTT TTACTCTTTG GGTGTCCTTA AGTTTTTGGT CTGTTTTATA AACAGCGCAG 1920 AGCTGGATTA AAAAAATCTT TGTCTTCCAT TGGTGAGTGT AGTTCACTTA TAATTATTAT 1980 GATTACTGAT ATATTTTACT GATAATTTCA ATCATTTATA CCATGCTATT TTGAACTGTC 2040 TATTTGTCTT GATTTTAAGG GTTTTTCTTT CTCATTTCTT 2080
|