EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS121-38015 
Organism
Homo sapiens 
Tissue/cell
LNCaP 
Coordinate
chr9:139694620-139694840 
Target genes
Number: 45             
NameEnsembl ID
SEC16AENSG00000148396
RP11ENSG00000227512
NOTCH1ENSG00000148400
EGFL7ENSG00000172889
AL590226.1ENSG00000221693
SNORA43ENSG00000199437
SNORA17ENSG00000212487
LCN15ENSG00000177984
ATP6V1G1P3ENSG00000224662
TMEM141ENSG00000244187
KIAA1984ENSG00000213213
NCLP1ENSG00000213212
C9orf172ENSG00000232434
PHPT1ENSG00000054148
MAMDC4ENSG00000177943
EDF1ENSG00000107223
TRAF2ENSG00000127191
FBXW5ENSG00000159069
C8GENSG00000176919
LCN12ENSG00000184925
LCNL1ENSG00000214402
C9orf142ENSG00000148362
C9orf139ENSG00000180539
ABCA2ENSG00000107331
FUT7ENSG00000180549
NPDC1ENSG00000107281
ENTPD2ENSG00000054179
SAPCD2ENSG00000186193
UAP1L1ENSG00000197355
MAN1B1ENSG00000177239
DPP7ENSG00000176978
GRIN1ENSG00000176884
LRRC26ENSG00000184709
TMEM210ENSG00000185863
TMEM203ENSG00000187713
NDOR1ENSG00000188566
RNF208ENSG00000212864
RNF224ENSG00000233198
TUBB4BENSG00000188229
FAM166AENSG00000188163
C9orf173ENSG00000197768
COBRA1ENSG00000188986
C9orf167ENSG00000198113
RP13ENSG00000260996
NRARPENSG00000198435
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF5MA0599.1chr9:139694678-139694688GGGGCGGGGC-6.02
KLF5MA0599.1chr9:139694734-139694744GGGGCGGGGC-6.02
SP1MA0079.4chr9:139694676-139694691GAGGGGCGGGGCCAC-6.02
SP1MA0079.4chr9:139694732-139694747GAGGGGCGGGGCTAA-6.34
SP2MA0516.2chr9:139694731-139694748GGAGGGGCGGGGCTAAG-6.79
SP2MA0516.2chr9:139694691-139694708CGGGGGGCGGGACTTGC-6.7
SP4MA0685.1chr9:139694674-139694691GGGAGGGGCGGGGCCAC-6.01
SP4MA0685.1chr9:139694730-139694747GGGAGGGGCGGGGCTAA-6.39
Number of super-enhancer constituents: 6             
IDCoordinateTissue/cell
SE_23713chr9:139692982-139695833Colon_Crypt_1
SE_24285chr9:139693125-139694645Colon_Crypt_2
SE_24285chr9:139694708-139695135Colon_Crypt_2
SE_25098chr9:139693022-139695891Colon_Crypt_3
SE_27891chr9:139692750-139696022Fetal_Intestine
SE_41726chr9:139693034-139695890LNCaP
Enhancer Sequence
GGTGGAGAGG CGGGGCTGGG AGGGCGGGGC GGAGTCCACT GGGGCAAGAC TCACGGGAGG 60
GGCGGGGCCA CCGGGGGGCG GGACTTGCGG GTCCCCTGGG GAGGGCTCAC GGGAGGGGCG 120
GGGCTAAGAG AGCACGACCC TCTCCGGAGA AAACCCAGCC CCGACACCCT CCGGGCGGCC 180
GGTCCCCACG CCCTCTCACT GCGCCCTCGG TCCGCCCCAG 220