EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-37998

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr9:139565140-139565400

Target genes

Number: 33
Name	Ensembl ID

GPSM1	ENSG00000160360
DNLZ	ENSG00000213221
EGFL7	ENSG00000172889
AGPAT2	ENSG00000169692
AL590226.1	ENSG00000221693
FAM69B	ENSG00000165716
SNORA43	ENSG00000199437
SNORA17	ENSG00000212487
SNHG7	ENSG00000233016
LCN15	ENSG00000177984
ATP6V1G1P3	ENSG00000224662
KIAA1984	ENSG00000213213
C9orf86	ENSG00000196642
RP11	ENSG00000228544
NCLP1	ENSG00000213212
C9orf172	ENSG00000232434
PHPT1	ENSG00000054148
MAMDC4	ENSG00000177943
EDF1	ENSG00000107223
TRAF2	ENSG00000127191
FBXW5	ENSG00000159069
C8G	ENSG00000176919
LCN12	ENSG00000184925
LCNL1	ENSG00000214402
C9orf142	ENSG00000148362
ABCA2	ENSG00000107331
NPDC1	ENSG00000107281
SAPCD2	ENSG00000186193
UAP1L1	ENSG00000197355
MAN1B1	ENSG00000177239
DPP7	ENSG00000176978
TMEM203	ENSG00000187713
NRARP	ENSG00000198435

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_13534	chr9:139563795-139565291	CD34_Primary_RO01536
SE_37985	chr9:139547754-139568497	HUVEC
SE_40809	chr9:139547596-139569983	Left_Ventricle
SE_42234	chr9:139547415-139572027	Lung
SE_53640	chr9:139549025-139570450	Spleen

Enhancer Sequence

GCATCGAAAA CGCCGCTGAG ACCTCAGCCT TGACCTCCCT CAGCGTGGCC GGGACCCTGA 60
GCCTCTGCGC AGAGCCACCC GCCCCGACGT ACTTAGGCGG CATAGCCCTG AGACCTCTGG 120
CCAGCGCCAG GCAGGCAGCG GGGGCGGCAG AGGCCTGGGC CTGAGTCTTC TGGCTCTGCC 180
TCTCCCTGGG GACAGGAGGG AGCCTGGGGG TGTGGGTGGG GAGCCGGCCG GCCGTGACCC 240
AGCGCCTGGC TCTGCCCGCA 260