| Tag | Content |
|---|
EnhancerAtlas ID | HS121-30249 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr5:67592170-67593230 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SCRT1 | MA0743.1 | chr5:67592920-67592935 | TACCACTTGTTGCAT | - | 6.24 | | SCRT2 | MA0744.1 | chr5:67592922-67592935 | CCACTTGTTGCAT | - | 6.17 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_03580 | chr5:67593023-67594156 | Brain_Angular_Gyrus | | SE_04979 | chr5:67590836-67595892 | Brain_Cingulate_Gyrus | | SE_07815 | chr5:67577501-67596875 | Brain_Inferior_Temporal_Lobe | | SE_34160 | chr5:67590758-67592474 | HCC1954 | | SE_34160 | chr5:67592558-67593279 | HCC1954 | | SE_60173 | chr5:67568634-67608587 | Ly4 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I068294 | chr5 | 67590759 | 67595892 |
|
Enhancer Sequence | TATGTATCTC CAGCAAACTT TTCTTTACAA CATCTCATGA AGAGATGTTT CATTTATTCA 60
TTCATTGAGT TTTGGGGGCA AAGATTTGAC ATAGTTTTAG TCTTGAATAA GCTTACAGTA 120
CAATAATGTA GAAGAGAAAC CAAAGCAGCT GTAATACCAT TTTAAAGTCT AGCCAGAAGT 180
GTATGTTAAT ACAGTCTAAT AGATACCTAC TGTTTAGTTG GAAGACTAGG TTTGGATTCC 240
CATTCAGTGC TAATTAATCA TGAGAAATCG CCAAGTCTTT TTTTCTCATC TTTAAAATGG 300
AAGTGGCAGT GCCTGCCTTT TTTGCCTCTC AAGGCTACTA TAGTTAGAAT CTGAGGTAAT 360
TTATGTGAGA ACATCACCCA TAGGAAAAAT ACTCATCAGG AACAGGTGAA AAAAAAAAGG 420
ATTCTGATCA TTATCCTTGA GATAGGTACA CCCACATTGG ATCACTGACA TCACCATTTC 480
CAAGAAATTA ATGTCCTCTA GTAGGGAATG GTTCTAAAAG TATGTTACAC TCCATGATCA 540
CCTTTCATTT AATGAGAGAA ATAGTCCTAC AGCAAAGAAG GGTACTTTTG TCCTTACTGT 600
GCATAAGGGC ACATGCAGAG ATGGAGAGTT GTGCAGACAC CTCAAGGACA GCCAGAAAGA 660
AGGAATCCTA TGAATAGTCA TAATGGGAGT AATAGTAACA CTGCTAGTCA TGGAGCACTG 720
CAGATAGTTG TCCTCATCAT GATTGGAAGC TACCACTTGT TGCATGCTTA CTGCATGTCA 780
GGCATTCTAT CTAGCATTTT GCATGCATGA TCTCATTTCA TTTCTCAAAG TAACTGTATT 840
ACATGTATTT TACTATTGTC TTCCCTTTAA ACCATTTTAA AGATGAAAAT ACAGTCAGTC 900
AGTGAAGCTG GGTTACCTAC CCAAGGCACT CGGCCAGGTG TCAGTTGTAA CCTAGGACCC 960
TTTCCCCAAG TTGAGACTGC ACAATAATGC TTTTTATTAA AGATGCCCTG AAGAGTTGTG 1020
AATTGTCTTG GACAAGCTCA AAAGACAGTT TTTCTTCTCT 1060
|
