| Tag | Content |
|---|
EnhancerAtlas ID | HS121-25867 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr22:41916280-41918830 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr22:41917052-41917073 | AAAAAAAAAAAGAAAGAAAAG | - | 6.41 | | NFIC | MA0161.2 | chr22:41917085-41917096 | TTCTTGGCAGA | + | 6.02 | | Rxra | MA0512.2 | chr22:41918800-41918814 | TGACCCTTAACCCC | - | 6.23 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03984 | chr22:41918033-41924123 | Brain_Anterior_Caudate | | SE_05892 | chr22:41901390-41918011 | Brain_Hippocampus_Middle | | SE_05892 | chr22:41918118-41930409 | Brain_Hippocampus_Middle | | SE_06851 | chr22:41915625-41916674 | Brain_Hippocampus_Middle_150 | | SE_06851 | chr22:41918480-41924269 | Brain_Hippocampus_Middle_150 | | SE_07846 | chr22:41916740-41925314 | Brain_Inferior_Temporal_Lobe | | SE_40727 | chr22:41918409-41925895 | Left_Ventricle | | SE_48334 | chr22:41918428-41924507 | Psoas_Muscle | | SE_48761 | chr22:41918239-41923987 | Right_Atrium |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH22I041519 | chr22 | 41915626 | 41916674 | | GH22I041522 | chr22 | 41918583 | 41923433 |
|
Enhancer Sequence | GTGAGCACCT TCCACCCCAT CTGTTTAGCA GGTCTCAGGG CCAGTGGCTC TGCCCAGGGC 60
TGTAGACAAT CACCTATGCC TACTGTGTGG CACTTTCTAA GGTGGGCAGT TTCTGAAATG 120
GGTTTATTAT TGAAAAATTA CTTTTTCGGC CAGAAGTGGT GGCTCATGCT TGAAATCCCA 180
GCATTTCAGG AGGCCAATGC AGGTGGATTA CTTGAGTCTA GGGGTTCAAG ACCAGCCTGG 240
GCAACATGGA AAAACCCCGT CTCTTAAAAG AAAATGCAAA AATTGGCCAG GGGCAGTGGC 300
TCACACCTGT AATCCCAGCA CTTTGGGAGG CCGAGATGGG TGGATCATGA GGTCAGGAGA 360
TCGAGACCAT CCTGGCTAAC ACGGTGAAAC CCCATCTCTA CTAAAAATAC AAAAAATTAG 420
CCAGGGGTGG TGGCAGGCAC CTGTAGCCCC AGCTACTTGG GAGGCTGAGG CAGGAGAATC 480
GCTTGAACCC AGGAGGCGGA GGTTGCAATG AACCGAGATT GTGTCACTGC ACTCCAGCCT 540
GGGTGACAGA GCGAGGCTCC GTCTCAGAAA AAAAAAAAAA AATTGGCCAG GTGTGGAGGC 600
GCATGCCTAT AGTCCTAGCT ACTCAGGAGG CTAAGGTGGG AGGATCACTT GAGTCCTGGA 660
GGTCAAGGCT ACAGTGAGCC GAGATGGTAC CACTGCATTC CAGCCTGGGC AACAAAGGCA 720
GACTCAAAAC TGCAGACTCA AGCAACAGAG CCTGCCTCCA AAAAAAAAAA AAAAAAAAAA 780
AAAGAAAGAA AAGAAAAATT ACTTTTTCTT GGCAGAAAAG AAAAATATGT TTATTGTAGA 840
GAATATTCAC AATCAAGAAG AATTTTTAAA ACTCCTAATC TCAACCCCCA GCCAGGAGCA 900
AGCTCTTAGA GCTCTTGGAG AGGTGTGCTG TGTTTCTGTG TATTGTGTGC ATAGATTTTC 960
CCGTTTTACA TTTTATATCA CCCATGCTGC TTTATGTGAC TTTTCATGCT TTACACATGC 1020
AGACGCCCTG GCATGCCAGT CACTGGCATC TGCTGCTGCT GGGTACAGTG TGGCTGTGAA 1080
GAGCATGGAG CCTGGAGCCA GATGGCCTGG GCTTGAATCC TGGCTCTGCC ACCTAACAGC 1140
CACTAACAGC TGAGTGACCC TGAGCAAACT ACTTCACTGT CTATGTGTGG GTTCCCCATC 1200
TGTAAAACAG GAGTCATGAT CGTACTGACA CCTTTGAAGG TGGTGTTGGG CCTACTGCTG 1260
CTATCACCAA TGAGAAAAAT AAATAAAAAA TAAAGTTGTC TGGAGAAGTG ACAATATGTG 1320
AAAAGAGATT TCTATACCGT CTGGCCGAAA ATAAGGGCAA TATAATGTGT TCGCCCTTAT 1380
TCATTGAAGT AATTTTAAGA AAAAAAATAT TTGGTGGTTT AATAATTAGA AAGTAAATTA 1440
CTAAATTAAT AAAAGAAACT ATCTTGGCTG GTTATATGGG CTTTTGCCAG TAATCCCAAC 1500
CCTTTTTTTT TTTTTTGAGA CAGAGTCTTG CTCTGTCACC CAGGCTGGAG TGCAGTGGCA 1560
CAATCTCGGC TCACTGCAGC CTCCGCCTCC CAGGTTCAAG CAGTTCTGCC TCAGCCTCCC 1620
GAGTAGCTGG GACTACAGGC GCCCGCCACC ATGCCTGGCT AATTTTTGTA TTTTTAGTAG 1680
AGATGGGGGT TTCACTGTGT TAGCCAGGCT AGTCTGGAAC TCCTGACCTC AAGTGATCTG 1740
CCTGCCTCGG CCTCTCAAAG TTGTGGGATT ACAGGTGTGA GCCACCGCGC CTGGCCAGTC 1800
CCAACACTTT GAGAGGCTGA GGCAGGAGGA TCATTTGATC CCAGGAGTTC AAGAGCAGCC 1860
TGGGCAACAT GGTGAGACTT TGTCTCTACA AAAACAATTT ATTGAATTAG CCAGGTGTGG 1920
TGGTACTCAC CTGTGGGTCC CAGCTACTCA GGAAGTTGAG GCAGGAGGAG TTGCTTGAGC 1980
CCCAGGAGTT AGAGACTGCA GTGAGCAAGC CTCGACTGTG CCCTTGCACT CCAGCCTGGG 2040
CGACAGAGCA AGACCCCATC TCAACAACAA CAAAAAGAGA CTGTCTAGAC AGAAAGTGCG 2100
ATGTTATTCA GGTTTTATAG ACTTTTTAAA AAGAACTCTT ATTGCCCTGA TTATAAAACA 2160
ATCTTTAAAA CCCAGAAAAT ACTAGAAAGT ATAAAAGAAG AAAATTAGCA TCTCCTGTCA 2220
GCCCCAGCCC ATCAAGGATG GCTGTTCGTA TGAGCCCTCT GACGTGCCTA CACGTGTACA 2280
TGATATTGCT GTAAAAGGGG TCATAGTCCT AATGTGTTCA GCATCATGGC CAATGGCTAC 2340
AGCATCTTTC TTCAAATGAC GCCACGTCAT GAGTTAGCCT GTCCTTTATT GTTGGATATT 2400
TCGGTTGCTT GCAACTGGTC TCTGTTAAAA AAGTCTCTGG CCCAGCCCAG ATGGTGAACT 2460
CTTTTGGCCA AGTCTGGATA ATTTGAAGTC AGGTGGAGAC CTCTGCTCAC TGTCTCCTCC 2520
TGACCCTTAA CCCCACCACC CACAATGCAC 2550
|
