Tag | Content |
---|
EnhancerAtlas ID | HS121-24427 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr20:62321800-62322150 |
Target genes | Number: 15 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr20:62321809-62321829 | GCTGGGTGGGCGGTGTGGGG | - | 6.33 |
|
| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_34303 | chr20:62321829-62324462 | HCT-116 | SE_34912 | chr20:62321675-62324299 | HeLa | SE_42708 | chr20:62321913-62324809 | Lung | SE_50948 | chr20:62316381-62324779 | Sigmoid_Colon | SE_57664 | chr20:62320929-62322674 | VACO_503 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I063680 | chr20 | 62312015 | 62325295 |
|
Enhancer Sequence | ACGGGCAGCG CTGGGTGGGC GGTGTGGGGG TGGCGGAGCG GGCGGCGTGG GGCGGGCAGC 60 ACCAGGCGCC CAGGGCGGAG GCGACTCACC TGGCTTTGTG CGCTTCCCCT CCCACCTCCA 120 AAGGCTGCCT CTCCCTCCTA GGGCAGGGCC CCCACGGGCT GCAACCCTCC CCTACAGGCA 180 GAGAACGCCC CAGGCAAGGA TGCCCCCCGA GGCTGAGACT CCCCCCAATA GCAGGGAGGA 240 CACCCACAGG CAGGACCCCA AGTGCTGGGA CTCTCCCCCA AGAGGGGCTT TGCCACAGGC 300 AGGGACCCCA GCTGGGGCCC CCCGTGGGCT TCACTGCGCA CTCGGGTGCC 350
|