| Tag | Content |
|---|
EnhancerAtlas ID | HS121-23736 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr20:31041560-31043920 |
SNPs | | Number: 3 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NR3C1 | MA0113.3 | chr20:31043164-31043181 | TGGTACAGAATGTCCCC | + | 6.2 | | NR3C2 | MA0727.1 | chr20:31043164-31043181 | TGGTACAGAATGTCCCC | + | 6.44 | | RREB1 | MA0073.1 | chr20:31043624-31043644 | GGGAGGGGGATGGGTTGTGG | - | 6.47 | | TFAP2C | MA0524.2 | chr20:31042416-31042428 | TGCCTCGGGGCA | - | 6.14 | | ZNF263 | MA0528.1 | chr20:31042360-31042381 | CCCTCCATCTTCTCATCCTTC | - | 6.73 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_03291 | chr20:31042275-31042864 | Brain_Angular_Gyrus | | SE_03291 | chr20:31042984-31043781 | Brain_Angular_Gyrus | | SE_04048 | chr20:31042529-31043615 | Brain_Anterior_Caudate | | SE_04930 | chr20:31035196-31047428 | Brain_Cingulate_Gyrus | | SE_05885 | chr20:31030957-31047533 | Brain_Hippocampus_Middle | | SE_06864 | chr20:31031268-31047399 | Brain_Hippocampus_Middle_150 | | SE_07969 | chr20:31032204-31047362 | Brain_Inferior_Temporal_Lobe | | SE_65380 | chr20:31033291-31047138 | Pancreatic_islets |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH20I032454 | chr20 | 31042276 | 31043781 | | GH20I032456 | chr20 | 31043841 | 31046453 |
|
Enhancer Sequence | GGGACTAAAA GGAGGGCAAG AGGCAGAGGG TTGGGCCAAG CAGCTGCTCA AGCCCTTGCT 60
GGGTCTCCTA CAGGCGGTGA GCTTGGGGAC CAGGGTGGCA CGCATGCCCT GCTGCCACGA 120
GAGCCATAGC TGCGAGGCCC TGAGCAAGTC ACTCCCCTCT TCTGCTCCCT TCATCTGTGC 180
AATGGGGACA GCAATGCTAC CACCTCCCTC CCTGGGCTGC CGCAGGGAGG ACCGACTGCA 240
ATAGTGTATG CAGAGACCTG GTTCCCGGGG CTGCTGAGCG CTTAGGAGGG TGTCAGCTGT 300
TTCCTCAGCA GAGGCCAACA CCAGGACCTG CCACGTGTAC AGGGGAAAGG CAGACATGGA 360
AAGGACTCCC ACCACCCGCC AGCCTCCTCT CGTGCCAAGA TATATTTTGG CTTCGGGGTT 420
TTCCTCCCTG ATCCCCAAGG GGCTGCAACC CCAAGTTGAC AACCGAGCTG TCACCAAAGC 480
AACGAGCATG CTGTCTGTCG GGAGGAGGAA CAGATGCGCT GGGCGAGGTA GCCAGCCAGG 540
GCGACAGGTC CGTTCAGCAG GATGCGTTCC CGCAGCTCCT GAGCTGGACT TCTCCTGTCT 600
GCCCCCCACC CAGGACAGCA CAGTGGCCCC TTGAGAATAT GCGGGTAGAA AGGGAGAGGG 660
AACCGGATCC GGCCTCCCCC AGCAGTCTCC TGTCCTCCAG TAGAGAAGGG CTCCAGCCCT 720
CTGCTCCCAC CACGAGTTTC TCCCTGGCCA AGCCCCTCAA CCATCTCTCC TTAGGAGCAG 780
CTCCCTCTTT TCCCCCATGC CCCTCCATCT TCTCATCCTT CATGGCTCAG CTCCCACACC 840
ACCTGTCTCC TGCCCCTGCC TCGGGGCACC GCTCTGGGAC GGCTGAGGAC CACTGTTGCC 900
TTTCGGAAAG TTTGTGCCTT CGATGTGTCC TAAGTACTCG TTCAGATCGT GACTGACAGT 960
AGCCTGGGGA CACTGTCCCT GCCCTCAAGG AGGTTGGCAT CTAGCAGGTA AGGCAGGCTC 1020
AGGGAACAGG TGGCGGTATG GTCAGACCCT GTGATGTGGC AGCATGGCCA TGGCACAGCC 1080
CGGAAGGGAA CAGCACTCAC TGAGGAGCAA ATCCAGGAAG AAGGGCATTG CCTGGCACCT 1140
GGTCCCACAG CACGGCCCCC GCCAGGCCTC TCTCCCTGGG ACCAGGCCCG CAGGGGTTGG 1200
TGCCCTAGGG TCACTGGCCT GGTGCCTGTC TCTTCGTCCA CATACAGACT TGGATAGGGG 1260
CAGGATGCCG AGGGCCCCCG CTGGCTACCA TAACTGGCCG TGTGGCCCCA GGCAAGCCAC 1320
ATTCCCACGC CACTCCTCAG CCAAACCCTG AGCCAGGGCC AGGGCAGACA GATGGAGAAA 1380
AAACTAAGAT AGGAGCTGCT GGTGGCGTTC CTGCTCTCAT CTCACTTCCC TGGGCCCCCC 1440
ATGTACCCTG TGGCCACAGT GGCAATGGCT GCTGAACACA ACTCACCCCC TTCATGGAAC 1500
AGCAGCTATG CCTGTCCCTT GGACCCAGGC AAAGCCTGCT CTGGCCAGAA CCTGCTCCCA 1560
GCCACCTGTG CTAGACACAT AGCAACAACT CAGCACTGAG CCCATGGTAC AGAATGTCCC 1620
CACGAGACAT TCCAAATGAG GCAGGCAGTA GCACCTACTC CACTCTCTCT GCAGAAGAGA 1680
AAACAGGCCC AGAGAGGGAG AAGAGCCTGT CCAGAGGTGT AAGCTCCAGG AAGGCACCTC 1740
TGGCCCCCGG GCCCAGGTTG GAGAAGAGGC ACTACTACAG GAAACCTTAG TGGCCCGGAG 1800
GCAGCTTGTG GAAGTGTGGG GGAGGCCCCA GGAAGCAGGG GGGATGCCCA CTGGTAGGGG 1860
TACGTACTGT GCCCACCCTT ACCACCGTCC ATCAGCCTAG TCAAAGGAGG AGTTCCACTG 1920
CCCACATCCC TGGGCCCTCG CCCTTTTTTC GCACGACCTA TAAAATGGGG ACAGGCACGC 1980
AGACAAACCA GGCAGTGGGA GGCCTCGTAC CTGGCTGTGC CGAAAGTGGC CACTTGCTGT 2040
TATCCCCAGC AGATGCTGTT CTGGGGGAGG GGGATGGGTT GTGGGGATGC ATATCCACCT 2100
ACCACCTCTA CCAAGGCAGG GGCCGTCAGC TCCACTTCAC AGGCTCGGAG AAGGGGGCCT 2160
GGCTTGGGGG CACACTCCAA GCCATCTCCC ATTCCAGAGC TTCACCAGGA ACCGAACACA 2220
TACCAGCCAC AGCCACCACC CTGGCTCGGT GTCACACACA TGGGCTGGCT CCAGCTAAGC 2280
TCTGGGCGTA TACAATTTCA TTCTCGCCTC GCGACAGCCC TTTACAGAAA GAAATGGACT 2340
CAGCCCCCAG CCCCACACAC 2360
|
