Tag | Content |
---|
EnhancerAtlas ID | HS121-23725 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr20:30816260-30818620 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr20:30818281-30818296 | GAGGTCAGGAGTTCA | + | 6.22 | Tcf12 | MA0521.1 | chr20:30816458-30816469 | CAGCAGCTGTT | - | 6.32 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_23334 | chr20:30814453-30816779 | Colon_Crypt_1 | SE_24146 | chr20:30815819-30816697 | Colon_Crypt_2 | SE_27939 | chr20:30810036-30825497 | Fetal_Intestine | SE_28625 | chr20:30801421-30825494 | Fetal_Intestine_Large | SE_41850 | chr20:30815211-30816626 | LNCaP | SE_52888 | chr20:30814138-30816927 | Small_Intestine | SE_56803 | chr20:30815842-30817112 | VACO_400 | SE_56803 | chr20:30817456-30817868 | VACO_400 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 4 | ID | Chromosome | Start | End |
GH20I032226 | chr20 | 30814241 | 30817003 | GH20I032229 | chr20 | 30817061 | 30817210 | GH20I032230 | chr20 | 30817241 | 30817430 | GH20I032231 | chr20 | 30817457 | 30817868 |
|
Enhancer Sequence | AACTTCCCCC TTCCTCTCTC ACTGGCTAAC TTGGATGTGT CCCTGAGCAT GGCCCTGGCC 60 TGTAGGGATC GGCCCCGCGT CCCAGCCAGA GCAGAGATCT CTCACTTGTT CTGGTTCGTG 120 GGATTGTGTC CCATCATCCC ACTGCAGCAC ATATCAAAAT GTAACTCCAG AGTGCCTGCC 180 AGCCAGGTCT CACTTTAGCA GCAGCTGTTT TTATCCTCAT TTTACAGATG GATAAACTGA 240 GAGATCAAGC CAGACCCCAG GTCAGGCAGC AAGCCATAAA GAGGCCACAG TCCAGGAGTC 300 CCCTGTCCTA GCTCAGTGTC TGGCTGGTAG ACTCCGTGTT GAAAAACTGA CTGTGGAGAT 360 GAGGCATGGC TCCCAAGAAA TGAAGATGTC ATCCTAACAG AATTTGGAGG CTGTTTAAAT 420 GTGCAGAATC CTTGTATTCC AATGAGGTTT TCACCTCTGT GTGAAAATAA CAGAATCAAT 480 ATAGATGGTC ACCTTGATTT ACCTAAGAAG ATATATAGAT ATGTTAGAAA TGCTCATTGC 540 AGAAAACTTG AAAAATACTA AAATTAAAAT TCACTCATAG CCAATTGATG AGGTAATCTT 600 ACATTTACCC ACTAAACTCT CCTCTTTCCC CCAGCCCCCA CAAAGAAAGG GAGCCAGAGC 660 CAGGATGTCT TATGAGTGGC TCCAACCAGA CATTCAAGGA ATAGTAATTC CCATCTATAC 720 TTTCCTACAA CATCAAGAGA TATAAGATTC TATTTTTTAT AAAGCTAGCA TAACACTAAT 780 ACCAAACTCA GATAAGGTCA GCTCAGAAAA TTATAGCCTG TTCTTGCTTA TGAACACAAA 840 TGCATAGGCC CTAAGTGAAA TATTAACAGG TCAAAGCCAA TAACATATTA GCACACAACA 900 CAAAACACGT AAAAATCTAT CGCAAGAATG TAATCAAATT TACTATATTA ACACCCAAAG 960 AAGAAAAATC ATATGATCAT CTCAATAGAG GCCAAGAAAG CATTTGATAA AAGTCACCAC 1020 CTGTTCATGA TAAAAACTCA TAACTAACCA GGAATAGAAT GGACCCACCT TAACTTGATA 1080 AAGGCTATCT CTCGAAACCA CAGCAGATAG CATACCTCCT GGGGAGCTAT TGGAAGTGTT 1140 CCCACTGTAG TTGGGAATCA TATAAGGCTG CCCGTTAGTA CTGCCACTGT TCAGAATTCA 1200 GTGAATGTCC CAGATAATGC AGTAAGACCA AGAAAAGTAA TTTTTGTTTC AAAATGCCAG 1260 GCTTTCTGTG CTGTGCCCAC CGCCCAGAAA GAACCACTGT TAACTCCTCC TCCTTCAATG 1320 CTTTTTTTTT TGAGACAGAG TCTCACTCCA TTGCCGAGGC TGGAGTGCAG TGGCAAGCAA 1380 AATCACAGTT CACCGCATCC TCCACCTTCT GGGCTCAGGT GGTGGTCCTC CCACCTCAGC 1440 CTCCTGGGTA GCTGAGACCA CAGGCGCACA TCACCACACC TGGCTAATTT TTGTATTTTT 1500 TGTAGAGATG GGGTTTTGCC ACGTTGCCCA GACTGGTCTC CAATTCCTGA GCTCAAGCTA 1560 TCAGCCTGCC TCGGCCTCCC AAGATGCTGG GATTACAGGT GCGAGGCACT GCGCCTGGTC 1620 CTCAGTGTTT TCTTTAAAAA TGTAGTTAGG CTGGGCGTGG TGGCTCATGC CTGTAATCCC 1680 AGCACTCAGG GAGGCCGAGG CAGGCGGATC ACGAGGTCAG GAGATCAAGA CCATCCTGGC 1740 TAACGTGGTG AAACCCCGTC TCTACTAAAA ATACAAAAAA TTAGCTGGGC GTGGTGGTGG 1800 GCACCTGTAG TCCCAGCTAC TTGGGAGGCT GAGGCAGGAG AATGGCGTGA ACCCAGGAGG 1860 TGGAGCTTGC AGCGAGCAGA GATCACACCA CTGCACTCCA GCCTGGGCGA CAGAGCAAGA 1920 CTCCCTCTCA AAAAAAAAAA AAAAAAATGT AGTTAGGCCA GGCACGGCTG CTCATGCCTG 1980 TAATCTCAGC ACTTTGGGAG GCCAAGGTGG GTGGGTCACC TGAGGTCAGG AGTTCAAGAC 2040 CAGCCTGGCC AACATGGCAA AACTCCATCT CTACTAAAAA TACAAAAAGT AGCCGGGCAT 2100 GGTGGCGGGT GCCTGTAGTT CCAGCTACTC GGGAGGCTGA GGCAGGAGAA TTGCTTGAAC 2160 CCCAGAGGCG GAGGTTGCAG TGAGTGGAGA TCACACCACT GCACTCCAGC CTGGGTGACA 2220 GAGTGAGACT CCGTCTCAAA AAAAAAAAAA AAATGTAGTT AGGTTCTTCC TGTATAGCCT 2280 GTCTTTTTCC ACTTACCAGG TCTTGCTTCT GGGGTTCCAG GGCAGTTGCC AGTATTTAAC 2340 CCTGTTCCCC GCTCTCCGTA 2360
|