| Tag | Content |
|---|
EnhancerAtlas ID | HS121-23633 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr20:25002170-25003570 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF4 | MA0039.3 | chr20:25002850-25002861 | GCAGGGTGTGG | - | 6.62 | | Nr2f6(var.2) | MA0728.1 | chr20:25002776-25002791 | GAGGTCAGAAGTTCA | + | 6.38 | | RARA | MA0729.1 | chr20:25002776-25002794 | GAGGTCAGAAGTTCAAGA | + | 6.88 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_23688 | chr20:25003017-25004342 | Colon_Crypt_1 | | SE_25265 | chr20:25003177-25003785 | Colon_Crypt_3 | | SE_27084 | chr20:25003126-25004417 | Esophagus | | SE_31460 | chr20:24996497-25002448 | Gastric | | SE_31460 | chr20:25002997-25005191 | Gastric | | SE_40636 | chr20:25000284-25002712 | Left_Ventricle | | SE_40636 | chr20:25002976-25007909 | Left_Ventricle | | SE_41643 | chr20:24999390-25002554 | LNCaP | | SE_41643 | chr20:25003310-25003984 | LNCaP | | SE_42209 | chr20:25000227-25002645 | Lung | | SE_42209 | chr20:25003014-25005194 | Lung | | SE_47497 | chr20:25001537-25002338 | Pancreas | | SE_47497 | chr20:25003225-25003555 | Pancreas | | SE_51643 | chr20:25000945-25002425 | Skeletal_Muscle | | SE_51643 | chr20:25003231-25007648 | Skeletal_Muscle | | SE_52650 | chr20:25002860-25005148 | Small_Intestine |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH20I025022 | chr20 | 25003056 | 25004148 | | GH20I025020 | chr20 | 25000946 | 25002425 |
|
Enhancer Sequence | AGCTGCAGAG ACAGGAAAGG AGCATCAGGA GCTTGTCCCC CCACTCCACC ATGTTCACAC 60
CAGGTCACTA GGAAATAGGC ATGCATAGGC TGCAGTCCAT AGCTGTGAGA GGCAGCTGGC 120
TCCTCAAATG GCCTCCAGCA GCAGGACAGG TGGGCACACT GCAGAGTCCG TCTAGTTGTA 180
CGTTTAACAC ATGGACACCT TTTTGCATTA CCTTATGCCA CGATTTTTTA AACCCCTTAA 240
GAACTACAAA AAATAAAAGC AAAAAAGGCC AAGAATGGCA TCAAGCATCA TCAGCTTCGA 300
GGAGCATGAG AGGACAGACA TCCGAATCCC CTTTATTCTT CCACAGCAAC TGAGTGGAGC 360
CTGATCCCAT CTCAGGATCT AACTGCCCAC GTGCAGGAAA CACAGAGGCA GAGGGACAAC 420
AGGCACAACC CAGACCAAAG GACACCAGAG AAAAATGGCT GGATGTGACT ATGGCCAAGT 480
GTAAGGAAAT GGGGGAGCAT AGGCTTAAAA AGACTTAAAA CACATATCAA CAATATTTTA 540
GGCCGGACAC GGTGGCTCAC ACCTGTAATT CCAGCACTTG GAGAGGCCAA GGCGGGCAGA 600
TCACTTGAGG TCAGAAGTTC AAGACCAGCC TGACCAACAT GGCAAAACCC TGTCTCTACT 660
AAAAATACAA AAAAAAATTA GCAGGGTGTG GTGGCAGGTG CCTGTAATCC CAGCTACTCA 720
GAAAGCTGAG ACAGGAGAGT CACTTGAACC CAGGAGGCAA AGGTTGCAGT GATCTGAGAT 780
CACACCACTG CACTCTAACC TGGACAACAG AGTGAGACTC CATGAAAAAA CAAAACAAAA 840
CAAAACAAAA CAAAACAAAA GAAAAAACAA TATTTTAATT GGCAACAGTA AGCTACAGTG 900
CCCACGGATG CTCATATGGG TCACAAAACT ATCAAAATAA AAACAGGGCA GGCGCACAAG 960
ACACATCAAG ACATGCTGGA CGGGGCTGTG GCCATATGGG CCTGGAAGGG GCTTCTGAGA 1020
AACCGGTGGC CTTCCACTTC TTGATCAAAG TGGCATTTGC CTTATAATAA TTCATTAAGC 1080
CATGCATTTA ATTTGGGTGG TTTTCTCTAT CTGTTCTAAA AAGAGTTTTT AAAAATCTTT 1140
GGGCGAATGG CCCTTAGTGT CCTGCTGCCG CGTTACATGA TCAGATTATC TGGGAGTTTC 1200
CAGACAGTGC AGTGGGGGCT TGAGGCAGCC AGGGCCCTGA GGAGCTGTAG GGTGGGAGGA 1260
CTCGAGGGGG CCCTGCCCCG AATAGGCCAG GAAGAAACAC TGACCTCTCA CACCTACAGG 1320
CCTCGCTCTG CAGCAGGAGG ACTTCCAGCC CTGCCCCTGC CTGGATCCCT GCCAAGGGCC 1380
CAGCACCGCC CGCACAGGCC 1400
|
