| Tag | Content |
|---|
EnhancerAtlas ID | HS121-21061 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr19:56204400-56206090 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:56205820-56205839 | TGCTGCCCTCTGGTTGTCA | - | 6.02 | | NR2C2 | MA0504.1 | chr19:56204651-56204666 | TGACCTCTGACCCGT | - | 7.63 | | Nkx2-5(var.2) | MA0503.1 | chr19:56204682-56204693 | CTTGAGTGCCT | - | 6.14 | | Nr2f6 | MA0677.1 | chr19:56204651-56204665 | TGACCTCTGACCCG | - | 6.47 | | Rxra | MA0512.2 | chr19:56204651-56204665 | TGACCTCTGACCCG | - | 6.41 |
|
| | Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
| SE_23398 | chr19:56205489-56206701 | Colon_Crypt_1 | | SE_23969 | chr19:56205607-56206643 | Colon_Crypt_2 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 56204845 | 56205005 | | chr19 | 56205624 | 56205945 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I055694 | chr19 | 56205490 | 56206701 |
|
Enhancer Sequence | CAGGTGAGCC CCTGCCCTCC CCTGCCCAGT GGCGAGAGGG AGCCTCCCCT AGCTCTTCGG 60
GAGCCCCGTC CCTTGCTGTC TTTGTCCCAC TCCAGGCAGG GCCGGCTGGA CTTAGGGATG 120
AAAAGTTCAG TTGGGTAGAG TGGGCCAGAA CCATCCACCT GTCTTTAAAA GAAGTGTGCA 180
TCTTTATTTT AGAGAAATTG CAGACTTAGA GAAAAACTGA GAATTGTTCT CAAGGTTTCC 240
CACCCGAATG TTGACCTCTG ACCCGTCTCT GCCTCCACGT TGCTTGAGTG CCTTGCAAAC 300
TCTCCAGGTG TCTCAAAGAA CACGGACTGT CTTGTCCTGT GCAGTGAGCT GCGTGGACAG 360
GGGTTTGGAA GGCAGCCGAG GCTCCCCTTC CGGGTCGCCA CTCACCTGCT GGTGGCTCCT 420
GGGCTGGCCA GGGTGCGTCC TCATGGGTGC TGCCTTTAGC TGCCCTGGCT CCTTGGGGTT 480
TTCAGCTGGC GTAAGCTGGC GCCCATCGCC GGTGACGGGC CCATCTGCTG AGTCCTGAGT 540
GGCTCTTCGT CAGGAGTGCC CGAGGTCATA GTGGGCCACT GGTGCTTCGC CGCGGCCCTC 600
AGCTGATACC TGTCTGTCCC ATGATGAGTC AGGTCAGCCT TGATCTCTTA TTTTTATTTT 660
AAGTGAGCTG TTAGTGAAGA GCAGGTTGTG GTACAGAAAC CTGTTTCCAC TGATGAAAGG 720
CTGGCAGCTT GCAGGGAGTG AGCTGCACCC ACGCTTCCCT CCTCTCATTA TCTAGGTTAA 780
CGTAGAGCAA CCTTCCAGCA TGCAGTTTTC CTTCTTTTAG GCCCTTTTTT GTCCCATACA 840
AATGTGTGCA TTTTTTCAAC ATTAGGTAGA ATTCTTAAAT CTATTTAAAA GGAAAATCAG 900
GCCAGGCGCA ATGGCTCACG CCTGTAATCC CAGCACTTTG GAAGCTCGAG GTGGGTGGAT 960
CACCTGAGGT CGGGAGTTCA AGACCAGCCT GACCACCATG GCCAAAACTC CGTCTCTACT 1020
AAAAACACAA AATTATTACC CAGGCATGGT GGCGCACGCC TGTAATCCCA GCTACTTGGG 1080
AGGCTGAGGC AGGAGAATCG CTTGAACCCA GGAGGTGGAG GTTGCAGTGA GCTGAGGTTG 1140
CGCCATTGCG CTCCAACTGG GGAAACGAGC GACACTCCGT CTCAGAAAAA AAAAAAAAAA 1200
AAAAAAAAAC AGAAAATCAG ACCTCTAGCC AACAGATGTC TTCACGCTGG CCCGGAACAC 1260
GTGTCTGTGC TGTCTGTCCA CTTGGAAGCT CCCTCTGGGG CTGTGTACTC AAGGAGCGTC 1320
TGAGGGCAGG CTCCTCTGAG CCTGGAGGCA CCTGTGAACA CGCCCCCGCT GCCTTCCCCC 1380
GCGGGCCTAT AGACCCTGGA CGGCCCCACC CTGAAGCAGT TGCTGCCCTC TGGTTGTCAG 1440
AGGGTGACAC CTGCTTCTGT CATCCCTCTT GTGTTTGCTC ACTGGAATCA GACCCACCTT 1500
ATGGGAATCT GGGCTGACGT GAGGTTTTGG CCTGGGCAAG CGATGCTTCC GCTCTGCACC 1560
TCAGTTCCTC CTTCCCGAGG CCTCTGGGCA CCGGGCTCTT TGAAGCGCCC CCTATGATGG 1620
CCTATACTGC TCCCGGGTTG GAGCCTCACT GCTGTCTGCC CTGTCTGAGC CCCTCTCCCG 1680
GATCCTTCCA 1690
|
