Tag | Content |
---|
EnhancerAtlas ID | HS121-20335 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr19:39218670-39219630 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:39219283-39219304 | TTTTTCTTTCTCTTTCTCTCT | + | 7.25 | ZNF263 | MA0528.1 | chr19:39219072-39219093 | TCCTCCTCCTCCTCCTCCCCC | - | 10.39 | ZNF263 | MA0528.1 | chr19:39219051-39219072 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219054-39219075 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219057-39219078 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219060-39219081 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219063-39219084 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219066-39219087 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219069-39219090 | TCCTCCTCCTCCTCCTCCTCC | - | 12.34 | ZNF263 | MA0528.1 | chr19:39219085-39219106 | CCTCCCCCCCACCTCTCCCCC | - | 6.45 | ZNF263 | MA0528.1 | chr19:39218706-39218727 | CTCTCTCTCTCTCTCTCCTTC | - | 6.56 | ZNF263 | MA0528.1 | chr19:39219042-39219063 | GCCACCCGCTCCTCCTCCTCC | - | 6.82 | ZNF263 | MA0528.1 | chr19:39219299-39219320 | TCTCTTTCTTCCCCATCCTCC | - | 6.89 | ZNF263 | MA0528.1 | chr19:39219048-39219069 | CGCTCCTCCTCCTCCTCCTCC | - | 9.07 |
|
| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_00865 | chr19:39216791-39220750 | Adrenal_Gland | SE_01543 | chr19:39216857-39220711 | Aorta | SE_03903 | chr19:39217065-39219066 | Brain_Anterior_Caudate | SE_04868 | chr19:39219157-39220818 | Brain_Cingulate_Gyrus | SE_05805 | chr19:39207187-39220624 | Brain_Hippocampus_Middle | SE_07777 | chr19:39216859-39220179 | Brain_Inferior_Temporal_Lobe | SE_23732 | chr19:39218469-39218832 | Colon_Crypt_2 | SE_24739 | chr19:39217370-39219051 | Colon_Crypt_3 | SE_24739 | chr19:39219073-39220334 | Colon_Crypt_3 | SE_26525 | chr19:39218141-39219132 | Esophagus | SE_26525 | chr19:39219242-39220104 | Esophagus | SE_27614 | chr19:39217995-39226375 | Fetal_Intestine | SE_28533 | chr19:39216812-39226417 | Fetal_Intestine_Large | SE_31384 | chr19:39218125-39226350 | Gastric | SE_40594 | chr19:39216438-39220773 | Left_Ventricle | SE_41601 | chr19:39219475-39220722 | LNCaP | SE_42097 | chr19:39215559-39220780 | Lung | SE_46686 | chr19:39218005-39219038 | Ovary | SE_46686 | chr19:39219381-39219816 | Ovary | SE_47114 | chr19:39164477-39226374 | Panc1 | SE_48555 | chr19:39216870-39220754 | Right_Atrium | SE_52339 | chr19:39216916-39219145 | Small_Intestine | SE_53291 | chr19:39215486-39226355 | Spleen | SE_65266 | chr19:39217724-39219187 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | TGCACCCTGG GCCCCAGCGG ACCATGGCAT TAACTGCTCT CTCTCTCTCT CTCCTTCTCT 60 CTTTCTCCCC TCGCCATCCC ACCCCTGCCA TCCTGTGTGC CATCTCATGG CTCTCTTGCC 120 TCCCTGCCCA CATCTCCCTG GACCCCTTCC CTTTTACCTG GTCTCTTGGG GCCGCTGTCT 180 CCCTGCTCCC CGCCACTGTC CTGTCTGCCT GCTGTGCACA TGGGGCGGCC CCTCTTGCCT 240 ACTCTGGGCC CGGCCTCCTC TGCTATGCCT GCGTCCTCGG AGCAGAAGCA GACAGGCAGC 300 ATGGACTCCG ATGACTTCAG GGCTCTGCTT ATCTCCACAG GATACAGCCT GGTATGCAGC 360 TCTGTCTCCC CAGCCACCCG CTCCTCCTCC TCCTCCTCCT CCTCCTCCTC CTCCTCCTCC 420 CCCCCACCTC TCCCCCTCAC CGCCTCCAGA GCTTCCTCGT CCTCGGGGAC ACTCCTCCGC 480 CCGAGCAGCG CAGCCGTGCC TGCCTCTTCC TCTGCTGCAT CTGCCGGGGT GGGGTCCCTC 540 CGATGACTTC CCGAGCCCCC CTTCTTCCCT AGAAGTCTCC AGAAAGAGGG GGCAGCTCTC 600 CCACTCTCTC CCCTTTTTCT TTCTCTTTCT CTCTTTCTTC CCCATCCTCC AGAGCTTACT 660 CGTGAGCCTG GGCTGAGGGC AGTAGACCCC AGTTCCCTGC TGTGGGAGAC CACGAGAGGG 720 GAGGGTGCAG AGAGGCCCTG CTTCCCGGCC TGGGGCACTG GGGGCTTGGA GGCCTGGGTC 780 AGCTGGAGCA GTGGCAGGCT CTGCCCGGGG CCAAGGCTGC TGGAGCAGGC GGGGAACAGG 840 GCGCACGCAC ACGTGGGTTG GGCCCTACTC TCTCGGCTGT TTCCCTGGAG ACCCCACCAG 900 TGTGGGCCTG GCTGCCCCTG CCCCACTAAA TGTCGGGTGT CCCCCACCCC ACCCTCTCCT 960
|