Tag | Content |
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EnhancerAtlas ID | HS121-20325 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr19:39205200-39207720 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HES2 | MA0616.2 | chr19:39205686-39205696 | GGCACGTGCC | + | 6.02 | HES2 | MA0616.2 | chr19:39205686-39205696 | GGCACGTGCC | - | 6.02 | IRF1 | MA0050.2 | chr19:39206922-39206943 | TGTTTGTTTCTTTTTCAATTT | + | 6.49 | Nr2f6(var.2) | MA0728.1 | chr19:39206763-39206778 | TGAACTCCTGACCTC | - | 6.22 | RARA | MA0729.1 | chr19:39206353-39206371 | AAGGTAAAAAGGTTATTC | + | 6.06 |
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| Number of super-enhancer constituents: 36 | ID | Coordinate | Tissue/cell |
SE_00865 | chr19:39197223-39205990 | Adrenal_Gland | SE_01543 | chr19:39194086-39205969 | Aorta | SE_01543 | chr19:39206726-39207291 | Aorta | SE_01543 | chr19:39207325-39209043 | Aorta | SE_03166 | chr19:39203289-39205715 | Brain_Angular_Gyrus | SE_03903 | chr19:39197211-39205540 | Brain_Anterior_Caudate | SE_04868 | chr19:39195321-39206058 | Brain_Cingulate_Gyrus | SE_04868 | chr19:39207314-39215407 | Brain_Cingulate_Gyrus | SE_05805 | chr19:39182078-39206004 | Brain_Hippocampus_Middle | SE_05805 | chr19:39207187-39220624 | Brain_Hippocampus_Middle | SE_07777 | chr19:39194039-39206085 | Brain_Inferior_Temporal_Lobe | SE_07777 | chr19:39206500-39216075 | Brain_Inferior_Temporal_Lobe | SE_26525 | chr19:39194058-39205949 | Esophagus | SE_29583 | chr19:39201125-39205951 | Fetal_Muscle | SE_29583 | chr19:39205983-39206638 | Fetal_Muscle | SE_31384 | chr19:39201638-39206004 | Gastric | SE_31384 | chr19:39206786-39208158 | Gastric | SE_36926 | chr19:39204544-39214311 | HSMMtube | SE_40594 | chr19:39194015-39206697 | Left_Ventricle | SE_40594 | chr19:39206700-39209031 | Left_Ventricle | SE_41601 | chr19:39204680-39205533 | LNCaP | SE_42097 | chr19:39194095-39205995 | Lung | SE_42097 | chr19:39206714-39214813 | Lung | SE_45660 | chr19:39196090-39205729 | Osteoblasts | SE_47114 | chr19:39164477-39226374 | Panc1 | SE_47461 | chr19:39204530-39205715 | Pancreas | SE_48075 | chr19:39198966-39206636 | Psoas_Muscle | SE_48555 | chr19:39195085-39205958 | Right_Atrium | SE_48555 | chr19:39206718-39215387 | Right_Atrium | SE_49449 | chr19:39204404-39205809 | Right_Ventricle | SE_50056 | chr19:39194910-39205530 | Sigmoid_Colon | SE_51136 | chr19:39195385-39206359 | Skeletal_Muscle | SE_53291 | chr19:39194893-39205783 | Spleen | SE_54534 | chr19:39196075-39206175 | Stomach_Smooth_Muscle | SE_65266 | chr19:39197900-39206193 | Pancreatic_islets | SE_65266 | chr19:39206494-39208241 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 39207411 | 39207514 | chr19 | 39206198 | 39206552 | chr19 | 39207199 | 39207258 |
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| Number: 2 | ID | Chromosome | Start | End |
GH19I038716 | chr19 | 39206727 | 39208158 | GH19I038673 | chr19 | 39164536 | 39206516 |
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Enhancer Sequence | CGTGAGTGTT CCCCCAGTGA AAGTCAGGGC CACCTCATTA TCCTCAGCCA GAGGTCACTG 60 TGACTCTTGC AGGGGGAAAG CAGGTGTGGC AGCGAGATGA CCTAGAAAAG GCTGCGTGGT 120 CACAGACCAT GGCATTTAGC CAGCTGGTGT GTACACGACC TCTCCGTTTG CTTCCACAAG 180 GCTAAGGGTC AGACCGGCAG CCACCTTGCC AGCCAGCCCC TGGGCTCCCG AGCTTGGGTT 240 CCTACAGAGA TGCTCAGGGA CAGTGTTTCC TGGGCACCTC AGTGCTTTAG AATCACCTGG 300 GGAGCTTTGT GAAAGCCCCT CTTCCCGTGC CCTGGCCCTG GAGAGAGTGA TTCAGAAGGA 360 TGGAGAGGGG CCTGGGAACC AATAGGATAG CAGGCCCTGT GCAGGTGCTT AACGAGCAGC 420 CCAGCAAGAC GGGAACTCGG ATTATCCTCC TTTCCAAGTG AGGAAACTGA GGCCCAGGGA 480 GGGTCAGGCA CGTGCCTGCT GTTACATGAC TAGTGGGACA GAGAGCTGGG CTTCACCCAG 540 GCAGCCCTGC TCTAGAGTCC AAACCCAATG CTTCAGTTGG AAATAAGGGT GGTTAGTACA 600 ACTCTTCTGG AGGCTCTTCA TTTTTGAAAT CTCCATATTT AAAAAATAAA CGTAGGCTGG 660 GCGCAGTGGC TCACACCTGT AATCGCAGCA TTTTGGGAGG CCAAGGCAGG TGGATCACTT 720 GAGGTCTGGA GTTCAAAACC AGCCTGGCCA ACATGGTGAA ACCTTGTCTC TACTGAAAAT 780 ACAAAAATTA GCCGGGTGTT GTGGCACACA CCTGTAGTCC CAGCTACTTG GGAGGCTGAG 840 GCAGGAGGAT CGCTTGAGCC TGGGAGGCAG AGGTTGCAGT GAGCCAAGAT TGCGCCACTG 900 TACTCTAGCC TAGCGACAGA GCAAGACTCC ATTAAAATAA AAATAAAATA AAATAAAATT 960 TCCCAAAGAG CAGTGGTTTG ACTGCTCATC TAGAACCAGT GGTTCCCAGA TTTTGCAATC 1020 TCATAGACCA GGAAAATTTG AAAAACTATT GGATGTCCAA CCTAAGAGGG CCAGCTTTTT 1080 ATTTTGCCAA GTTACGGATG TTTTAAAAAG AAACACTACC ATCTGTTACC ACCAGCACTT 1140 CTAACACCAA GATAAGGTAA AAAGGTTATT CTTAGAACCC CAGCCATTGC CAAGAAAGGG 1200 CAGCTGGCAG CACGCCTCAC AATGTATCCA CACAGAGGTA TTTCTGTCTT TGAATTTCTC 1260 ACTTTGCCAG AAGTTGGCAT TTGGGAACCA CTTCTCCAGC TTGTCCGTGC TGGCAGATAA 1320 CTGATTTTGT ACTTCTAGAA TTGTTTTATT ATTTTTTTGA GATGGAGTTT CACTCTTGTC 1380 ACCCAGGCTG GAGTGCAATG GCACGACCTT GGCTCACTGC AACCTCTGCC TCCCAGGTTC 1440 AAGCAGTTCT CCTGCCTCAG CCTCCCAAGT AGCTGGGATT ACAGGCGCGC ACCACCACGC 1500 CCAGCTAATT TTTGTATTTT TTTTAGTAGA GATGGGGTTT CACCATGTTG GTCAGGCTGA 1560 TCTTGAACTC CTGACCTCAG GTGATCCACT CACCTCAGCC TCCCAAAGTG CTGGGATTAC 1620 AGGTGTGAAC CAGCGTGCCT GGCCTAGAAT TGTTTTAGAA TGTCCAACTG TTTGTTACCC 1680 TTTCTCACTC CATTAAAGAT CTGAGTAGTT CCTAAAAGAA TATGTTTGTT TCTTTTTCAA 1740 TTTTATTTTC TAATTTATGT CCCAGGCCCA GTGCACATAC TGGCCTAGCC AGACTGAGCC 1800 AGGTGGGCTT GTCGGCCTTG CCCTTGAGGC ACTTAGTGAG CCCAGAAGCA GTCAGGCTCT 1860 CAGCATGGAG CTCAGTGAAG ACAGCGGCAG TGGGGCATGT GACAGCATGG AAAGGGACCT 1920 TTTTGGCGGG GGCATGGGAG TGGAGGTTTC CCCTCTTAGA CCTGAGGGAA AAGACTAAGA 1980 GCAAAGGCAT GGGCCAGGCA TGGTGGCTCA CCCCTGTCAT CCCACCACTT TGGGAGGCTA 2040 AAGTGGGATT GCTTGAAGTT CAGGAGCTCA AGACCAGCCT GGGCAGTATA CTGAGACCCC 2100 CTTCTCTATA AAAACTTAAA ATAAAAATCA GCCAGGCTCG GAGGTAGGCA CCTGTAGTCC 2160 CAACTACTTG GGAGACTGAG GTGGAAGGAT GGCTTCAGCC CGGGAGGTTG CTATGATCAT 2220 GCCACTTCAC TCCAGCCTGG GTGACAAAGC GTGAACCTGT CTTTAAAAAG AAAAGCACAG 2280 GCAGGAACAG GAAGTAACAA GAGAACAGTA CAGTGATGCA GGGACAGGGA GGGAGCCCAC 2340 GCTCCCAGAG TTCCAGGTTG GGGGTTCTAG CAGGAATCGT GGAGAAGTTG GGCTGGGGAG 2400 CAGGGGTAAC CCCCTAAGGT GGGGCCCTCA AAGATCCAGA TCCCATGTGC CCATAAGCTG 2460 GGGGGCAGCC CGTCAGCACT CTGAGGGTCC CCCACAAAGG CCACGCTGGC TTCTGTGGCC 2520
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