Tag | Content |
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EnhancerAtlas ID | HS121-19533 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr19:13198950-13201110 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF8 | MA0652.1 | chr19:13198961-13198975 | ATGAAACCGAAACC | + | 6.77 | IRF9 | MA0653.1 | chr19:13198960-13198975 | GATGAAACCGAAACC | + | 6.22 | ZNF263 | MA0528.1 | chr19:13199990-13200011 | GGAGGTGGGCAGGGTGGGGGA | + | 6.04 | ZNF263 | MA0528.1 | chr19:13201088-13201109 | CCCTCTCTCCCCTGCTCCCCA | - | 6.08 | ZNF263 | MA0528.1 | chr19:13199917-13199938 | CTTTTCCCCTCTCCATCCTCT | - | 6.18 | ZNF263 | MA0528.1 | chr19:13199545-13199566 | TCCCTCTCCCGTCCCTTCTCC | - | 6.49 | ZNF263 | MA0528.1 | chr19:13200305-13200326 | TCTCCAGCCTCCTCCTCCTCT | - | 6.88 | ZNF263 | MA0528.1 | chr19:13201085-13201106 | TCTCCCTCTCTCCCCTGCTCC | - | 7.54 |
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| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_00024 | chr19:13199869-13205773 | Adipose_Nuclei | SE_01540 | chr19:13195780-13199226 | Aorta | SE_01540 | chr19:13199326-13205530 | Aorta | SE_03137 | chr19:13199901-13200728 | Brain_Angular_Gyrus | SE_03859 | chr19:13200177-13205958 | Brain_Anterior_Caudate | SE_06518 | chr19:13191845-13208017 | Brain_Hippocampus_Middle | SE_06678 | chr19:13199268-13216772 | Brain_Hippocampus_Middle_150 | SE_07717 | chr19:13199946-13205923 | Brain_Inferior_Temporal_Lobe | SE_26520 | chr19:13200110-13207804 | Esophagus | SE_29770 | chr19:13200001-13205484 | Fetal_Muscle | SE_40665 | chr19:13200250-13202182 | Left_Ventricle | SE_41557 | chr19:13199673-13201459 | LNCaP | SE_46667 | chr19:13199816-13200065 | Ovary | SE_46667 | chr19:13200200-13202208 | Ovary | SE_48559 | chr19:13199819-13205956 | Right_Atrium | SE_51076 | chr19:13199815-13205310 | Skeletal_Muscle | SE_54519 | chr19:13199870-13204977 | Stomach_Smooth_Muscle | SE_61813 | chr19:13190199-13217386 | Toledo |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I013084 | chr19 | 13195688 | 13199226 |
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Enhancer Sequence | GTAAGTGGAC GATGAAACCG AAACCACAAC GCCCAGCGTC CCCGGCCCGT CCAAACAGTC 60 TCCACTGCAA AAAGAAAAGC CTTCCCCCTC CCCACCACCA AAGCCCCCCA ACCCAGAGCA 120 CCATGGACAA GAGCAGAGCC GAGCCCCCCA ACCACAGCCT CCCTCCCGGG CCTCAGTCGC 180 ACCAGCCAGC ACCCCACGAG CCCCCTGCCC GCTGCTCCCA GCCGGGGCCC CTGGCCCAGG 240 CCCCTCTGGG GGGCGGGAGG GAGAGCACAG CTGGGGCGCG CAGGCCAGGG GTGCTGGCGG 300 GGGTGGGAGG GGGCGGGGAG GCACAGCCAT GCCATCTTCA TGCCTGATTG CTGTTTTTTT 360 TTTTTTGTTT TTTGTTTTTG TTTTTTAATT TTTTTGTTGT TTCGTTGTTC CCCCCACACC 420 AAGAAAATCA AATGTAACCA CAAGGCGACG CCACCACCAT CCCCTTTTTG CCTTGCCCCT 480 CACCTCCATC CCTGGGCCCT TGGGCCTCAA AGACGCAGCA GGCCAGCCCG ACCCCTTCCC 540 CCTCAGTCTC ACATTTGGTT TCTCGTTGTT CCTCTTTTTT TTTCCCCCCC TTCCATCCCT 600 CTCCCGTCCC TTCTCCGCAA TTCCTTTCCC AGGTTAGATG TTCCAAGGAC GAGGGAGGGC 660 TGTGGGCTTT GGCTTACTTC ATCTCTCTCT CTGTCTCTCT TTCTTTTCTT TTCTTTTCTT 720 TTTTTTTCCT CTTAAACCAA TGACAAATTT TGTCAAAGGG AAAAGAAGAA AAATCATTCG 780 AGAGGTCCCA GGTAGACCCG GCGTGAAGGA CAGGAGGATG GGGCGGGTGC TGTCTGTGGG 840 CCAGGGTGGG CAGCTCTGGG GGTGGGCAGG CCACAGGCCA GGGCAGTTCG GTGGCGGTGG 900 GAGGGGTGGC CCATCTCACA CTGCTCTCCG CTCGCTTTGT CTCTCCTCCT TTCTCGTGGT 960 TTGAGTTCTT TTCCCCTCTC CATCCTCTTC ATGCCATCTT CCCATCTGCA TCCACCATAA 1020 GACATGAAGT CACAGTCATT GGAGGTGGGC AGGGTGGGGG ATGGGAGCTG GGCTACAGGG 1080 TTCGGGGGCC ACTTCTGGAG AGAGGTGGGC AGAATCTGGT GAGCATGGAG TCCCTGGGTG 1140 TGTCTGGTGC AGGGCAGCGG CGGGCCTTCC AGGTAACCTG TGACACTCCT TGCCTCCTCT 1200 GGGGGCATCT TCCCTTCTGG GGGTGCAGGG CCTGTTCCCT CCAGCAGGGC TCCATCTGGA 1260 CAACCTGAGA GGAACTCAGG GCTGTTGAGA TCATTTTGTC TTTGGGCCCC AGGATGGCTG 1320 CTCCCAGGCA TCTGAGCCCT AGGGCTCTGC CAGGCTCTCC AGCCTCCTCC TCCTCTATTG 1380 CCTTGGTCCT GGAACCACAG GCCTGTTGGA CCTGGTGCAT CAGTCAGAGG AGGAGAATGC 1440 CATAGGCCTG AGCCTTGCCA CCCCCTGGGC CCAAGCCAGG CAGCCAGCTC CTAGGCCCTT 1500 CTCTGACCCT GCCCTACCTG GCTCAGACCT CCATTGGGCA CCCTTTGGGT TCCCCAAGCC 1560 TGCCTGCCTG GTCCTTGGGC CTGCCCAGAG TGGTAAGAGG TGTAGCATCT AGCTAGGCCA 1620 CCCAGGTTGG AGAGGTAGCC TGGCTGGGAA GGCCTTCCCG AAGCAGGGTG GGGCCGGACT 1680 GCCAAAGCCT CCACCCTCCC CTGGCCCCCT CTCTTCAGTA CCTGAGAGGG GCCAGTGGGA 1740 AAGCAGGGTT ATCCACTGAG GGTACCTGGG GACCAGGGCT ATCCCCAGCC CTGCCCAGTG 1800 CCTCACTAGC GGGTGGAACT GGGTCCAGGA GACTTGTCTC AGCCTCCAGG GCCTCTCCCT 1860 CATCCCAGCT GTGAAAAAGG ATGCCTGGCT GAGACTGTGG CTTCTGAGTG GGTGTGTGTC 1920 GGGGGTGTAG TGTGTGTTCC TGGTCAGTGA GAGGATGAGG GTGTCCCTCT GTAGTGGGGG 1980 GCAGGCTCGG AGCCTGGCCT TCAGCTCAGA TGCCCCTCTG GCCCATCCTT CCCACTGCCA 2040 GCCTAAACTC GGGCAGCATG GTCTAACTCA GTCTCTCCCT CTCTCAGCAG CCCCGAGGGG 2100 CAGTGCCCAG GTGGGCCCCA AGGCCTGACA GGGTCTCTCC CTCTCTCCCC TGCTCCCCAC 2160
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