Tag | Content |
---|
EnhancerAtlas ID | HS121-19218 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr19:8368970-8369910 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:8369534-8369552 | CTCTCTTTCCTTCCTTTC | - | 6.33 | EWSR1-FLI1 | MA0149.1 | chr19:8369547-8369565 | CTTTCTTTCCTTTCTTTC | - | 6.33 | EWSR1-FLI1 | MA0149.1 | chr19:8369538-8369556 | CTTTCCTTCCTTTCTTTC | - | 7.64 | Foxd3 | MA0041.1 | chr19:8369212-8369224 | GTTTGTTTGTTT | + | 6.32 | IRF1 | MA0050.2 | chr19:8369577-8369598 | TTTTTCTTTTTCTTTTTTTTT | + | 6.09 | IRF1 | MA0050.2 | chr19:8369555-8369576 | CCTTTCTTTCATTTTTCTTTT | + | 6.72 | KLF13 | MA0657.1 | chr19:8369891-8369909 | CGCCAAGGGGCGTGGCCA | - | 6.18 | KLF14 | MA0740.1 | chr19:8369894-8369908 | CAAGGGGCGTGGCC | - | 6.08 | KLF16 | MA0741.1 | chr19:8369871-8369882 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:8369871-8369881 | GCCCCGCCCC | + | 6.02 | SP1 | MA0079.4 | chr19:8369895-8369910 | AAGGGGCGTGGCCAC | - | 6.43 | SP1 | MA0079.4 | chr19:8369868-8369883 | CAGGCCCCGCCCCCT | + | 6.75 | SP3 | MA0746.2 | chr19:8369895-8369908 | AAGGGGCGTGGCC | - | 6.02 | SP4 | MA0685.1 | chr19:8369893-8369910 | CCAAGGGGCGTGGCCAC | - | 6.14 | SP4 | MA0685.1 | chr19:8369868-8369885 | CAGGCCCCGCCCCCTGT | + | 6.88 | ZNF263 | MA0528.1 | chr19:8369526-8369547 | CCCTCCCTCTCTCTTTCCTTC | - | 6.48 | Zfx | MA0146.2 | chr19:8369868-8369882 | CAGGCCCCGCCCCC | - | 6.19 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I008304 | chr19 | 8369781 | 8369990 |
|
Enhancer Sequence | CCCTGGGGCA CAGGGTTGGT CAGGTCCCAA ATGCCCACCC AAGAAGGCCC AGGTACTCCC 60 TGAAACCCCA TCCCCTGCAA GCCCCACCCT CTAAGAACAG CTGAGCCCAA AAAAATGCTC 120 CCTTCCTAAG GCTCCGCCCC CTGCAACTGT TAACTCCACT TTCTAAGGAC AGGCCTCCCT 180 GCAAGCTCTT CCCCTGAGAC CCCACTAGCT CTACCTTCCT ACAAGCCCAC TTTATTCTAT 240 TTGTTTGTTT GTTTCTTTCT TTATTTTTTC TTTTGAGACG GGGTCTCCCT TTGCTGCCCA 300 GGCTGCAGTG CAGTGGCGCA ATCTCGACTC ACTGAAACCT CTGCCTCCCA GGGTCAAGTG 360 ATTCTCCTGC CTTAGCCTCC TGACTAGCTG GGATTACAGG GGCCTGCCGC CACATCCAGC 420 TAACTTTTGT ATTTTTAGTA GAGATGGGGT TTCACTGTGT TGGCCAGGCT GGTCTCGAAC 480 GCCTGACCTC AAGTGATCCG CCTGCCTTGG CCTCCCAAAG TGCTGGGATT ACATGTGTGA 540 GCCACCGTAC CTGGCTCCCT CCCTCTCTCT TTCCTTCCTT TCTTTCCTTT CTTTCATTTT 600 TCTTTTTTTT TTCTTTTTCT TTTTTTTTCC TGAGACAGTC TTACTCTGTT GCCCAGGCTG 660 GAGTGCACTG GCACAATCCT AGCTCACTGC AGCGGCAACC TCCCAGGATC AAGTGATCGA 720 TCCTCCCACC CTAGCCTCCC AAAGTGCTGG GATTGCAGGC GTGAGCCACT GCGCCCAGCC 780 CAAGCCCATC TTAGACCCCG CTTCTTATGA CCCACAGACC CAAGTCGCAC CCATCCCTGC 840 GGCCCTGCCT TTCCCACAAG CTCCACCTCC GCGTGCCTGG CCCCTGACAA ACCACCCTCA 900 GGCCCCGCCC CCTGTAAGCC CCGCCAAGGG GCGTGGCCAC 940
|