Tag | Content |
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EnhancerAtlas ID | HS121-18849 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr19:4048240-4053960 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
E2F6 | MA0471.1 | chr19:4053161-4053172 | CCTTCCCGCCC | - | 6.62 | FOSL2 | MA0478.1 | chr19:4052639-4052650 | CTGAGTCACCC | - | 6.02 | JUNB | MA0490.1 | chr19:4052639-4052650 | CTGAGTCACCC | - | 6.02 | NR2C2 | MA0504.1 | chr19:4052420-4052435 | TGCCCTTTGCCCCCT | - | 6.57 | Nfe2l2 | MA0150.2 | chr19:4052637-4052652 | TGCTGAGTCACCCAG | - | 6.53 | Nr2f6(var.2) | MA0728.1 | chr19:4050277-4050292 | TGAACTCCTGACCTC | - | 6.22 | Nr5a2 | MA0505.1 | chr19:4052768-4052783 | CCTGGCCTTGAACTC | - | 7.77 | PRDM1 | MA0508.2 | chr19:4050739-4050749 | TCACTTTCAC | + | 6.02 | REST | MA0138.2 | chr19:4049477-4049498 | GGCCCTGTTCCAGGTGCTGAA | - | 7.29 | SP1 | MA0079.4 | chr19:4052588-4052603 | GGTGGGCGTGGCTGG | - | 6.27 | SP3 | MA0746.2 | chr19:4052588-4052601 | GGTGGGCGTGGCT | - | 6.78 | SP8 | MA0747.1 | chr19:4052588-4052600 | GGTGGGCGTGGC | - | 6.62 | SPI1 | MA0080.4 | chr19:4052046-4052060 | GAAAAGAGGAAGCA | + | 6 | SPIC | MA0687.1 | chr19:4052046-4052060 | GAAAAGAGGAAGCA | + | 6.1 | Zfx | MA0146.2 | chr19:4050166-4050180 | CCCGCCTCGGCCTC | + | 6.01 | Zfx | MA0146.2 | chr19:4048588-4048602 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 52 | ID | Coordinate | Tissue/cell |
SE_00556 | chr19:4049923-4053993 | Adipose_Nuclei | SE_00903 | chr19:4051122-4053452 | Adrenal_Gland | SE_03556 | chr19:4052061-4052634 | Brain_Angular_Gyrus | SE_03556 | chr19:4052677-4053771 | Brain_Angular_Gyrus | SE_04051 | chr19:4051050-4053901 | Brain_Anterior_Caudate | SE_04973 | chr19:4049183-4050152 | Brain_Cingulate_Gyrus | SE_04973 | chr19:4050987-4054301 | Brain_Cingulate_Gyrus | SE_05886 | chr19:4049142-4054407 | Brain_Hippocampus_Middle | SE_06913 | chr19:4051156-4053943 | Brain_Hippocampus_Middle_150 | SE_07962 | chr19:4051116-4054356 | Brain_Inferior_Temporal_Lobe | SE_09464 | chr19:4049379-4054371 | CD14 | SE_19502 | chr19:4051131-4052685 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20194 | chr19:4051042-4053347 | CD56 | SE_22707 | chr19:4051118-4052169 | CD8_primiary | SE_23073 | chr19:4049204-4050148 | Colon_Crypt_1 | SE_23073 | chr19:4051104-4055602 | Colon_Crypt_1 | SE_23728 | chr19:4049235-4050129 | Colon_Crypt_2 | SE_23728 | chr19:4051096-4055552 | Colon_Crypt_2 | SE_24683 | chr19:4049267-4050091 | Colon_Crypt_3 | SE_24683 | chr19:4050184-4050900 | Colon_Crypt_3 | SE_24683 | chr19:4051363-4055625 | Colon_Crypt_3 | SE_26455 | chr19:4050295-4053778 | Duodenum_Smooth_Muscle | SE_26575 | chr19:4049218-4050143 | Esophagus | SE_26575 | chr19:4050210-4050924 | Esophagus | SE_26575 | chr19:4051029-4053825 | Esophagus | SE_27700 | chr19:4049198-4049962 | Fetal_Intestine | SE_27700 | chr19:4050230-4050969 | Fetal_Intestine | SE_27700 | chr19:4051001-4053741 | Fetal_Intestine | SE_28696 | chr19:4050044-4053952 | Fetal_Intestine_Large | SE_31428 | chr19:4048766-4050860 | Gastric | SE_31428 | chr19:4051045-4053687 | Gastric | SE_41127 | chr19:4049212-4050107 | Left_Ventricle | SE_41127 | chr19:4051251-4052543 | Left_Ventricle | SE_41127 | chr19:4052607-4053938 | Left_Ventricle | SE_41816 | chr19:4053013-4054138 | LNCaP | SE_42412 | chr19:4051091-4054207 | Lung | SE_47637 | chr19:4051162-4051968 | Pancreas | SE_47637 | chr19:4052696-4053353 | Pancreas | SE_48492 | chr19:4049012-4050852 | Psoas_Muscle | SE_48492 | chr19:4051110-4053550 | Psoas_Muscle | SE_48938 | chr19:4049217-4050193 | Right_Atrium | SE_48938 | chr19:4051119-4052583 | Right_Atrium | SE_50061 | chr19:4049238-4050100 | Sigmoid_Colon | SE_50061 | chr19:4050254-4050931 | Sigmoid_Colon | SE_50061 | chr19:4051103-4055645 | Sigmoid_Colon | SE_53358 | chr19:4051019-4054942 | Spleen | SE_56975 | chr19:4051139-4053491 | VACO_400 | SE_57558 | chr19:4051769-4053600 | VACO_503 | SE_58113 | chr19:4051982-4052592 | VACO_9m | SE_58113 | chr19:4052624-4053807 | VACO_9m | SE_62529 | chr19:4051126-4090382 | Tonsil | SE_65287 | chr19:4048846-4053724 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr19 | 4052414 | 4052757 | chr19 | 4053092 | 4053572 | chr19 | 4051584 | 4052099 | chr19 | 4049310 | 4050005 | chr19 | 4051168 | 4053889 |
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| Number: 2 | ID | Chromosome | Start | End |
GH19I004047 | chr19 | 4047705 | 4048809 | GH19I004049 | chr19 | 4049227 | 4054233 |
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Enhancer Sequence | GCCTGTGGAC GGGGCACGGG GCGGGCACGG TCAGTGGGGC CGGGGACCCC CGATCCCCGC 60 CCAGGGACCC TCACGGACAC GGCAGGCCCT GGATCATCAC CCTTGCAGAA CACGGACCGT 120 GCACCAGAGG TTTCGGTGCC CCGATGGGGA CGGTCCCTCG AAAAACGAGA CGAGTGGGGG 180 CGATTTCGCA TTCTGAACAT CTAAAGAGGG CCTCGGACCC TGAGTGCTGT GTGGCCTTGG 240 GAAAACGCTA TGCCTCTCTG AACCCCGTTT CCTTTCCTTT TTTAACTTTT TAAGAGACAA 300 AGTCTAGGCC AGGCGCGGAG GCTCAGGCCT GAAATCCCAG CACTTTGGGA GGCCGAGGCG 360 GGCGGATCAC TTGAGGCCAG GAGTTCGAGA CCAGCCTGAT CGACACGGTG AAACCCTGTC 420 TCTACTAAAA AAACAAAAAA CAAAAAAACA AAAAACAAAA ATCAGCCGGG CATGGTAGCA 480 GGCGCCCGTA ATGCCAGCTA TTAGGAAGGC TGAGGCAGGA GGATCACTTG TATCTGGGAG 540 GTGGAGGTTG CAGTGAAACT CCGTCTCAAA AAAAAAAATT TCACTTTTTA AGAGCGAAAC 600 TCCGTCTCAA AAAACAAATC TGCCAGGCGT GGTGGCGCAG GCCTATAATC CCAGCTACTT 660 GGGAGGTGGA GGTTGCAGTG AGCCCAGATC ACGCCACTGC CCTCCAACCT CGGTGACAGA 720 ATGAGACTGT CTCCAAAAAA AAAAAAAAAG AGAGGCAGGG TCTGGCTTTG TCCCCCAGGC 780 TGGAGGGCAG TGGCGTGATC ACGGTTCCCT GCAGCCTCGA ACTCCTGGGC TCAAGCCATC 840 GTCCTGCCTC ATCCTCCAGA GTAGCACACG CACCACCACA CCCTATTAAA TAGCTATTAA 900 ACTATATGTG TGTGTGTGTG TGTGTGTATA TATATATATA TATATATATA TATATATATA 960 TATATATGTA AGTTTGAGAG ATGGGGGTTG AGCTACGTTA CCCAGGCTAA TCTCAAACTC 1020 CTGGGCTCAA GTGATCCTCT TGCCTCGGCC TCTCAAAGCT CTAGGATTAC AGGTGTGAGC 1080 CACTGCGCCC GCCATGAACC CCTTTCCCTA CCACAGAAGG AGACAGTGGG CTTCTGCCAC 1140 TCCATCCTGC CCCTACCCCT GGGGTAGGAT GAGGCCAGCC AGTGCCTGGT GCCTTCATTC 1200 ATGCCACAGA CCTTTGCCGA GCGCCCGCTG AGGGCCAGGC CCTGTTCCAG GTGCTGAAAA 1260 TACCGCAAGG AACAAGACAG GCAAACATCC CTGCCCTCTC GAGGCTGGCG GCGGCCGAGG 1320 TGTTTGGTGA CAGATAGGGT GACCAACTGT TCTGGTTTTA GCACTGAAAG TCCTGCATCC 1380 TGGGAAACCC CTCTGTCCGG GACAAAGTGG GGCAGTTGGT CACCCTAGTA ACCAAGTCCC 1440 CACCCCACGA CACCCAGGAC TGCCCACTCT CCCCTCACTT CAGCGTCACT CCCCTATCTG 1500 GGCTCCACCC TGACGTGCAA AGGTGCAAAG CACAAGCTAC GCTGGGGCCT TTGCATGTGC 1560 TGCTCCCGCA GTCCGGGGTA CTTTCTTTTT TCCTCCTGGA TCTTCACAGT CAAATTTGGG 1620 CTCAAATGTC ACCTCCTTCC CCAGCCCTGT CTCCATCCTC CTGTCATCAC CACCTGACTC 1680 TTCTATTGTT TTTTTTTCTG AGACCGAGTC TCGCTCTATC TTCCAGGCTT GAGCGCAGTG 1740 GTGTGGTCTC CGCTCACTGC AACTTCCGTC TCCCGGGTTC AAGCAATTCT TCTGCCTCAG 1800 CCTCCCAAGT AGCTGGGATT ACAGGCCCTC TGCCACCACA CCTGGCTCAT TTTTGTATTT 1860 TTAGTAGAGA CGGGGTTTCA CCATGTTGGC CGGGCTGGTC TCGGACTCCT GACCTCAGGT 1920 GATCCACCCG CCTCGGCCTC CCCAAACGCT GGGATTACAG GCGTGCGCCA CCACACCTGG 1980 CTGATTTTTG TATTTTTAAT GGAGACAGGG TTTTCACCAT GTTGGCTGGG CTGGTCTTGA 2040 ACTCCTGACC TCAAGTGATC CGCCTGCCTC GGCCTCCCAA AGTGCTGGGA TTACAGGCGT 2100 GAGCCACCGC GCCCGGCCGG TCTCTCTTGT TTCTGTTGAT TTCCTTGTTT CTCCTCTGTC 2160 TCCCTGATTG GATTGTGAGC CCCGAGAAGG CAGGGGTTGG GTGTGACTTG AGGGCCCCTC 2220 CCTGCCTGTC TCGCCCCATG GGGGCAGCGT GGACCCAGCT TAGCCTGGAG CCTCTAGCCT 2280 ACAAAGCCGG TCACCATATC AGTGGGGTGC CTGTGGCCTA GGTGGCTCCT GAACCCTTGG 2340 AATGTGGCCA CTCTGAACTG ATGTGCGCTG GAAGTGCAAA AGGTACCCCA GCTTTTGAAG 2400 ACTTGATATG CAAAAGGTGA TGTAAAATGG CTCAATGAGG ATCGTGCACA TTGACTACAC 2460 ATGGAAATGC ATCTACTGGG TTAGGTAAAA TGTTTCAAGT CACTTTCACC AACTCTCTTT 2520 GACTTTTTTT GAACGGGGCT GTCAGAAAAT GTAAAAATAT GTAAGTGGCT TGCTGGCCGG 2580 GCATGGTGGC TCACACCTGT AACCCCAGCG CTTTGGGAGG CTAAGGCGGG CAGATCACCT 2640 GAGGTCAGGA GTTCGAGACC AGCCTGGCCA ACGTGGTGAA ACCCCGTCTC TACTAAAAAT 2700 ACAAAAATTA GCCGGCATGG TGGTGGGCGC CTATAATCCC AGCTACTTGG GAAGCTGAGG 2760 CAGGAGAATC GCTTGAACCT GGGAGGTGGA GGTTGCAGTG AGCTGAGATC GTGCCACTGC 2820 ACTCCAGCCT GGGCGACAGA GCAAGACTCG TCTCAAAAAA AAAAAAAAAA AAAAAAAAAA 2880 AAGTAGGTGT CTTGCCTATT CCCATTGAGT GATGCCAATC TATAGTAATA AAGTGTACTC 2940 CTTCCTGGGA TCCGGAGGGC AGGAGGGAGC CCTGGGTCTC AAGAGCCCTG GCTAGAACCT 3000 GACCTACTCC TTGCTGCTGC CTGTTGTGCC CCACATCTGA GCCACCTCGG GTTTCTTCCT 3060 TCTCACACTC AATAGACTGA AGACTTCTTT AGTGTGGGGA CTGGCAAACT CCTACTCATC 3120 CCTCAAAGCC CTACCTTGAA TGCCCCTCTA CCTTTCCTAA TTCCCAAAGA CCTGGCTCCC 3180 CTCTGGGTTC CTCCAGCCCT AAGTCCCTCC CTCTGGCACC AGCTACAGAG CTGGTGTCCC 3240 TAACTTTAAC CCCTCCTTGG CTCTGTTGCC CTGAGGGTCA AGGCCTGGCC CTTGGCAACC 3300 AGACCCCTAC CTTATCTCTA GCCTTGCTGC CCCACTGAAG CCAACAGAAC GTGGTAACTT 3360 GCTAACAGAA CCCTGGCCTA ACCAGGTCTG TTACCAGCCT CCAGGCCTCT GGTTTACTGA 3420 TCACCTTCTG CAAAGCCCAC GGCAAGGTCT CCGGGCTGCC TTGCCCAGAT CTGGCACAGG 3480 GCCGGGGTCA CAGAGGGGAT GGCAGCCACT AGGTTTTTCT AGAACCGTGC AGAGACTCCC 3540 CAGATGAGCC TGGGAGGCCC AGAGAGAGGA AGGGACTTGC CTGGAGCTGC ACAGCAGGCC 3600 AGAGGGCCAC GCAGAGGCGG GGTGGGGGCG GAGGTATCCC TAGTTTCATC ACCCCGAGCC 3660 CCAGCCTGGG TAATTATAGC CCCGGCCACC ACAGGCCCCA CTTACTCAAC GCCCTGCTGT 3720 GACTCAGAGG GGCCTCGGGC TCCCAGGCTT TTGGAGGGTG GAGGTGCTGG TGTCCTGGGG 3780 AGGGGGGACC AGAGCACGGG GTGGGGGAAA AGAGGAAGCA GGTGGGTCTA AATTGGGGTG 3840 GGAGGAAGAG GTCTCCACAA TTGTCCCTCT CTAAGCCTCA GTTTCTCTGA CTGAGGGGAT 3900 CAGCCCCGGG TCGGGTGGGA TAGCCAGCAG TGCCCGAGTC AGAATGAAAC CGGGCCTGTG 3960 GCCTGCGGCC AGGGAGGCAG GGTGGGGGTC ACCACCTTCG CTCAGCCTGG TCCCCTCTGC 4020 AGACCCCAGT TCTCTGCACC CCACCAAGCT GCTCTTCCTG AGCTCAGAGA CGAACCCACA 4080 GTGACCCCTG CCTGGAGGAA GAGGAGCCCC CCAAGACCTC CAGTACCCCA ACCTCACCAA 4140 GGAGGGACAA ACCACCAGCT ACACTGCCTG CCTCCCAAAG TGCCCTTTGC CCCCTGCCTG 4200 GCACTCCTGG GCGCCGGAGT CCAGGCCGCA CCTTCCTCTC CTGGCCTGCT GGGGAGGGGG 4260 CCGGGGTGCT GGGGAGGGGT CAGTCCCAGT TCCTGTCCCC ACGGGGTGGG GTTGGGAAGC 4320 TGGGACAATG GCCTCTTTCT TCAGCCTCGG TGGGCGTGGC TGGGGGAACC CCAGGGCGGG 4380 CGGGGGGCAG GGGGTGGTGC TGAGTCACCC AGCCTGGCCA GGTCCCTGCC TGCCAGCCCC 4440 CTGCCCCCAC CGCTACAGCC CGCCCCGGAT CTACGAGGCC CAGCCAGCCA CCTCTGGACT 4500 CCTGAGACCG AATTGCAAAC TGCCCGGGCC TGGCCTTGAA CTCCTGCTGT TTAGGGACCA 4560 AGTCCTGTGG CTCCCAGGGG GGCACAGTGA TCTCTCAAGC TGAGCTGGCC TCAGGGCCTC 4620 TGCACTGGCT GTTCCCTCTG CCTGGAACGC CCTTTCCCAC AGCTGCTCCT CCCCTCCTTC 4680 AGGTTCCGGC AAGGCCTGTC CCCGGCGCCT AGAACAGGCC TGGCACCAGC AGACGCTTCA 4740 TAAATGTTGG CTGATTGAAG CAAATGACCC AGGCTCACGG GAAACTCAGA AGCCGCTCCA 4800 CGGCCTGGGC TGTCCCTCCC TAAGCCTGAG GGCCTGTCAC CCTCTCCCAA AGCAGAAAAA 4860 GAAAAAAATC CAAAAGTGCA GAAGAGAAGA ACCAGCCCTC CAGGAAGGAA GAACGACTGT 4920 GCCTTCCCGC CCACCTCCCG CAGCTCAACC CTGTCCGGCA CGCTTTGCAT ATGATGTGGC 4980 TGTCATCTTA TGTCTGGCCT GTGCTGTCAC CCACCGGGAT GTCCACCCAC AAGGGCAGGG 5040 CCTGGTCTAG GCTGTTCTTA ACAGCCACGT GGGTCAGGGA AGCGTTCGTT GGCTTTGGGC 5100 CCAAGAGGTG GGGTGTGTCT GTTTGCGTGT GTGTGCATAT ATGTGTGTCT GTGGGTGCAT 5160 GTTTGCATGC ATGTGCATGT ATGTGTGCGC ATGTACGTGT CTGTGTGCAT GTGCCTGCAT 5220 GCATGTCTGG GGGTGCGTGT GCATCTGTGT GCGTGCCTGG GTGTGCGTGT GTGCGTGCGT 5280 GCGTGCGTGC ATGTGTATGT GATGTGTATG TGGTGTGCGT GTGTGTGCGC GCATGTCGGT 5340 GTGCGTGTGT GTGCGTGCAT GTGTATGTGA TGTGTATGTG GTGTGCATCT GTGTCTGCAT 5400 GTGTCTGTGT AGCATGTCTG TATGTGTATG TGGTGTGCGT GTGCGTGTGT GCGTCTGTGT 5460 GTGTGCATGT GTACGTGGCA TACGCGTCTG TGCATGTGTG TGCATGTGCG TATATATGTG 5520 CAAGTGCGTG TATGTGTGTC TGCGTGTGTG TGGATGTGTA GGTGACGTGC ATGTGTCTGT 5580 GCGTGTACGT GTCTGTGTGC ACGTGCGTGT ATGTGTGCGT CTGCGTGCAT GTGTGCGTGC 5640 GGTGCAGGGA GAGAGGCGGG AGGGGTCGTG AGCGGCGGAT GCTGGGGCAG AGAGCAGGAC 5700 GGCGCCTCCC CCGCGGCGGG 5720
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