EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-18499

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr19:1397500-1397800

Target genes

Number: 19
Name	Ensembl ID

RNF126	ENSG00000070423
FSTL3	ENSG00000070404
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
POLR2E	ENSG00000099817
SBNO2	ENSG00000064932
STK11	ENSG00000118046
CIRBP	ENSG00000099622
NDUFS7	ENSG00000115286
AC005329.7	ENSG00000248015
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
APC2	ENSG00000115266
C19orf25	ENSG00000119559
REEP6	ENSG00000115255
MEX3D	ENSG00000181588
AC005943.1	ENSG00000239367
MBD3	ENSG00000071655

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl

MA0603.1

chr19:1397539-1397549

GGTCACGTGC

6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_06415

chr19:1377850-1398313

Brain_Hippocampus_Middle

Enhancer Sequence

GGTCGGGGAT GGCACCAGGT CACCTCTGAG GGCCATGGGG GTCACGTGCA CCCTGGCGCC 60
CACCCCTCAT TGAAGAGTGT TTACAGATGG CAAGGCCCGG GTGGGCGGCT GCAGCTCCCG 120
TGGGCACGTG GCAGGGCAGC CCTGGAAGCC CAGGTGTGAA CGGGAATCTC CAGCTCCCCA 180
GTGCGGGCAG CAGCTTCCCG GCTGTCCTGG AACCCCAGCC CCACACTCGA GCCACCCCCG 240
GGCACCTACT CCACAGTTCT CCAGACCTTG CCAGTGTGGC GGGTGGAGCC AAAGAATCAC 300