EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-18440

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr19:1111090-1111500

Target genes

Number: 26
Name	Ensembl ID

WDR18	ENSG00000065268
HCN2	ENSG00000099822
RNF126	ENSG00000070423
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
BSG	ENSG00000172270
C19orf6	ENSG00000182087
CNN2	ENSG00000064666
ABCA7	ENSG00000064687
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
C19orf26	ENSG00000099625
ATP5D	ENSG00000099624
MIDN	ENSG00000167470
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
NDUFS7	ENSG00000115286
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
MEX3D	ENSG00000181588
AC005943.1	ENSG00000239367
MBD3	ENSG00000071655
TCF3	ENSG00000071564

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ar	MA0007.3	chr19:1111260-1111277	GAGAACAGCATGTTCTT	-	6.23
Ar	MA0007.3	chr19:1111260-1111277	GAGAACAGCATGTTCTT	+	6.24
Myod1	MA0499.1	chr19:1111192-1111205	GGGAGCAGCTGCA	-	6
NR3C1	MA0113.3	chr19:1111260-1111277	GAGAACAGCATGTTCTT	+	6.07
NR3C1	MA0113.3	chr19:1111260-1111277	GAGAACAGCATGTTCTT	-	6.1

Enhancer Sequence

GTCTGCGGGG AGAGGGGCCT CACATGCTGG TCTTCCCACC CCTGCCCCTC CCTCGAAGCC 60
CCTAGCTCCT TTTCCAGAGA CCAGCAGCTC CCTGGGGGGC TGGGGAGCAG CTGCAGCCTA 120
GGGCCAGGGC CAGGGCCAGG AGCGGAGCCT TTTGCCTGAC TTACAGGAGT GAGAACAGCA 180
TGTTCTTGGG GAGTAAACCC AAACCCCAGG CCCCTCAGCT GCCCTGGAAA CCCACCCGGC 240
AGCTGCTGGG GGCCGCCTTG GCTCCCTTTG CCTTCACAGC CCTCTCTGTC CGTGTGTGGG 300
GAGGGGTCAC TCAACACACA ACCGGCCTAC AAAGCCTGCT GCCCCAGCTG CTCTGGAGCC 360
CAGTGCTCTG CAACCCCTGC CCCTCCCAGG AAGACCCCCA CCAGCCCAGC 410