EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-18412

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr19:1071360-1071630

Target genes

Number: 23
Name	Ensembl ID

WDR18	ENSG00000065268
BSG	ENSG00000172270
ABCA7	ENSG00000064687
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
NDUFS7	ENSG00000115286
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
ADAMTSL5	ENSG00000185761
MEX3D	ENSG00000181588
AC005943.1	ENSG00000239367
MBD3	ENSG00000071655
TCF3	ENSG00000071564
CTB	ENSG00000261526
FAM108A1	ENSG00000129968
SCAMP4	ENSG00000227500
BTBD2	ENSG00000133243

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr19:1071605-1071623	CGAGAAGGGGCGTGGCCG	-	6.18
KLF14	MA0740.1	chr19:1071608-1071622	GAAGGGGCGTGGCC	-	6.62
Klf12	MA0742.1	chr19:1071607-1071622	AGAAGGGGCGTGGCC	-	6.16
MYC	MA0147.3	chr19:1071399-1071411	GAGCACGTGGCG	-	6.62
SP3	MA0746.2	chr19:1071609-1071622	AAGGGGCGTGGCC	-	6.02
SP4	MA0685.1	chr19:1071607-1071624	AGAAGGGGCGTGGCCGG	-	6.24

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_60953	chr19:1064596-1089072	DHL6
SE_69041	chr19:1070501-1072005	H9

Enhancer Sequence

AGGGGACAGG TGCCGGGCGC TGGGTCCCGC CGCGTCCGGG AGCACGTGGC GCTCGGGCCG 60
TTTGCCGCCC GCGGTGGGGG AGCAGCGGCT GCCGCGCGCC TGGCCTGGCC GTGCGCACCT 120
GGGCATCCCT GCGCTGCGCA GGGGTCGCGC CGGCCGCCGG CTTCCCGGGT AGGGGGTGTG 180
CGGGGACAGC CGGGGGTCCG TGCGCCGGCC GCGCGCGGAG TGCCGGGTGC CCGGCTGGAA 240
GGTCCCGAGA AGGGGCGTGG CCGGGGCCTC 270