| Tag | Content |
|---|
EnhancerAtlas ID | HS121-18204 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr18:72178250-72179680 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| DUX4 | MA0468.1 | chr18:72179060-72179071 | TGATTAAATTA | - | 6.62 | | GFI1 | MA0038.2 | chr18:72179112-72179124 | GAAATCACTGCA | + | 6.74 | | IRF1 | MA0050.2 | chr18:72178948-72178969 | AAAAAAAAAGAGAAACCGAGG | - | 6.66 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_04301 | chr18:72173505-72181659 | Brain_Anterior_Caudate | | SE_05085 | chr18:72173433-72183415 | Brain_Cingulate_Gyrus | | SE_05958 | chr18:72172809-72184685 | Brain_Hippocampus_Middle | | SE_06871 | chr18:72173363-72183833 | Brain_Hippocampus_Middle_150 | | SE_07976 | chr18:72173412-72184670 | Brain_Inferior_Temporal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | ACAGTGCCAA GCTGTACGGG TCACTTCTTT CTAACCCCTG AATCTCCCGG TTCTCCCAAA 60
CGCAAAGTAG ACAAGGACCC AGAAGTCAGG TGCACAGGAA GGAGAAGCAC AGGGCTCACT 120
TAGTGCCCCA ATTCCCAGCT TCCATAAACC ACCGTCCTAC ACCAGGGTGG ACAGCAACAC 180
TTCCAGTGAT CAGAAGTTAA TCTCACAGCA GCATCAAGGT AGGACAGTGT GATTTGTAAT 240
GTTGCTTTGG AGCGGCTGAG AGGAGATTAA ATGCTAGTTC ATTTCAGAAG ATGCAAACAC 300
ATACAAAGCA TTTTAGAAAC ACTTCCTTTT GAAGGTGGAA ATATTTATAT GTTAGCACTT 360
AGGCTCCTTA TCCCATGACT AAGTGACGCA CGGGAAAAAG AGAAACCGAG GCCGGGTGCA 420
GTGGCTCACG CCTGTAATCC CAGCACTTTG GGAGGCCGAG CCAGATGGAT CACTTGAGGT 480
CAGGAGTTTG AAACCAGCCT GGCCAACATG GTGAAACCCC GTCTCCACTA AAAATACAAA 540
AAGTTAGCCA GGTGTGGTGG CAGGTGCCTG TAATCCCAGC TACTCGGGAG GCTGAGGAAG 600
GAGAATCGCT TGAACCCGGG AGGTGGAGGT TGTAGTGAGT GGAGATTGCA CCATTGCACT 660
CCAGCCTGAG CTACAGAGCG AGACTCCACT TCAAAAAAAA AAAAAAAGAG AAACCGAGGC 720
AGCACCAAGA GTGGGAAGGG ACAGGCCTGG CTAGATTCTG CCACTCACTG GCTGGTGGTC 780
ATCTCCCAAT ACCCCACAGG ATGACTGTGG TGATTAAATT AGGTCCTGTC TGCAGACGTC 840
ATTTATAACC TGAACAGTGC TAGAAATCAC TGCAGTTGCT GCCCTGAGCC CTCACTCTGA 900
GCAAGGTACT GTTCTGGTTT TAAAAGTGGC TGCCTGTCAT CCCCAGTGCT GGGAGGAGCA 960
CTACGCCTCT TCCCATTTGC AGGCGAGGAG GCCGGGCACT CAGCAGGCAG CTGCCCTACG 1020
CTGGGTATGC AGCTGCTCAG TGCAAGGGCG AGGTCCGACC CCAGGTCTCC AGCTCCAGGC 1080
TTGTGGTGGG TCTCATTCCT GTTGGGCTGC CCTCTCAGCA GAGGTGCAGG GTCTTTGTTA 1140
AACTTCTAGC AAAGGCTTTG AGTGGTAGGC AGATTGCCCT GTGGAATGCT TGTACCTGTG 1200
GCTAGTGTTA CCGTCTTATC TGTGGTTGGC ATATGCCACA GATAAGCTGG TATGTTTTTG 1260
TTCCTGCCTA GGTTTTTAAT TTGGGAAATG CCTTGCTTTG CTCCCTGAGG GAGCAAATTT 1320
TGATTTGGGA AATTGTCAGG CCTTGTAAAT GCTCTTTGTT GAATTTACTG TCACATGATA 1380
AAAATAAGCT CCCACTAGGC AGCCAGACAC AGTGGCCTTT GTTTCCGTGC 1430
|
