Tag | Content |
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EnhancerAtlas ID | HS121-18202 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr18:72173250-72176070 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RELA | MA0107.1 | chr18:72175223-72175233 | GGAAATTCCC | - | 6.02 | SOX10 | MA0442.2 | chr18:72175598-72175609 | TTCTTTGTTTT | - | 6.62 |
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| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_04301 | chr18:72173505-72181659 | Brain_Anterior_Caudate | SE_05085 | chr18:72173433-72183415 | Brain_Cingulate_Gyrus | SE_05958 | chr18:72172809-72184685 | Brain_Hippocampus_Middle | SE_06871 | chr18:72173363-72183833 | Brain_Hippocampus_Middle_150 | SE_07976 | chr18:72173412-72184670 | Brain_Inferior_Temporal_Lobe | SE_53204 | chr18:72174631-72176726 | Small_Intestine |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr18 | 72173661 | 72174478 | chr18 | 72174508 | 72174614 | chr18 | 72174651 | 72174732 | chr18 | 72174764 | 72175394 | chr18 | 72175430 | 72175990 |
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| Number: 1 | ID | Chromosome | Start | End |
GH18I074505 | chr18 | 72172877 | 72177281 |
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Enhancer Sequence | GCGCCGCGCG CCTATGCGTG CCCAGAGGAA AGGCACTGAC TTTTGGAAAG TCATTGCTAG 60 TCCGTTTTTC TGTTTCCAGT ACAGACTGTT TTTATTTTAT TTTATTTATT TTATTACTTT 120 TTAAAAATCT TTTTTTGAGA CAGAGTCTCA CTCTGTAGCT CAGGCTGGAG GGCAATGGCA 180 AGATCTCAAT TCACTGCAAC CTCCGCCTCC CGGGGTTCAA GCGATTCTCC TGCCTCAGCC 240 TCCCCAGTAG CTGGGATTAC GGGCGCCCAT CACCACGCCT GGCTAGTTTT TTTATTTTTA 300 GTAGAGACGG GGTTTCACCA TGCTGGCCAG GCTGGTCTTG ATCTCCTGAC CTCAAGTGAT 360 CCCCCCCACC TCAGCCTCCC AAAGTGCTGG GATTACAGGC TTGAGCCACC ACGCCGGGCA 420 CAGACTGTTT TTAACGTAAG CTAGAAATGG AGGTTTCTTA CAGGTGCCTC TGTTGCTGAA 480 CTTCCAGAAA GCCTGCCTTT TCCTGTGCAA ATGAGCCCCC CGTGGCTGGC GTCTGCCAGG 540 CTTCCTCTAC TGCTGATGCT TTTTCTCAGA ATGCACATTT GGAATCCAGG CAGGGCCTTC 600 CTGAAAAGCC TGTCCCCTTG TCCCCCTCCC CGGCCCTTAC CAACAGCTGC TTCTGCGGTA 660 TATGTTAGTG GCCTCCTTCA CCCTGGCTGC CCCAGTGGGG GTGGCGATGT CCCTGTTATT 720 CACCAAGTGC TTCCGTGGGC CTGGCACCTG CAGGCCTTTT GAGGCCCGTG CTATGAGGGA 780 CCCCGCAGGC CAGCCTCTTT TCTTCCTGTT CCTTCTGGTG TAAAGGCCTT CTGCTTTCAT 840 TTCTGAATTT CCACATGTGC CTGCACGGGA GGCTTTGACC AGATGAGGAA TCCTCCCACC 900 CTCATGCTGG GCCCCTCTGG GCTAAGTTCC AGGCTCTTCT CATCGAAGCC CTTCCAACTG 960 GATCATTGCA TCTGTGTTCA AACCTTTCCT GGCCCAGTGT CAGTTGTGTT CATTACTGTG 1020 CAAAACTGAA ACTGACTTTA CTTAAAGCAA CATTTTTTAT GAGATGTAAT TCCATGTCAT 1080 TGTCCTTGTC ACGGTGGAAT TACTAACTTG CGGTGGATTG TAGGATTAAC CCTCTCTGTG 1140 CACTTGGGCG CCCCTCCAGC GTCAGACCCA CCTGTCTGCT TGGCCGTGCC CTCACTCCTG 1200 GAACTCGCTC TCTCTGGACA GAAGTCTTTG TCTTTGCTCC TTGTCCGCTG TCTTACAGTC 1260 TCCGCGGATG GCACCATCTC TCTGCCACCT GCACTGGGAA CTGGGTCCCC ATCCCTGCCA 1320 GGCTCTCCTC TGGGACCACT GCCCTTCCCA CGTTGAAAGC TCCCTGTCCC CCTCACCCAC 1380 TCCGTGGCTG GGTCCTGCTC TCCACTTCTG GGCCTTCACG GTGCCACTCC TTTTCTGGGC 1440 TGCTCCCAGA GTGACCTCAA CATGCCACTT CTCTTCTTGA CTCCTCTTGG GGGACTCAGG 1500 ATGGCACAGA GGGTCCCTCC CCTCACCTGC CTTCTGCCTG CCCCTTCTCC CACCTGTACC 1560 CAGCCACACG GGACCACGTG CAGCCCCCAG GAGCCTGTGC TGCTCAAAAC TGCACCTGGG 1620 CACCTGCGCG GGCGTCAGCC CCATCACCGC TGCCTCGTCC TCTGTGAGGC CTGCCTCCAG 1680 CCATCCTCTT AGCCCTCCCT GTCCCAGTCT CAGTAGGCTC CTGACTGTCA AGGAACCTAG 1740 AAGAGCACCT GTACTGTGGG AAAACTTCAC TCACTGCCAG CCGCCCGGCC TCCCTCTCCT 1800 TGTCAGGGAG CCCTGGAGGG TGGGGGCAGG TCACATTTGT CGGCAGCTCT GAGCCAGCAC 1860 CGTGCCAGCC GCTGTAGTTG TTCAGTGTTT GTTGTAGGGA TAAGGATTGT TGTTTTAGAA 1920 AAGCTTATAT TTGATCTTCA GTTTTTGTGA AAAGTTGGGT TTCATTCGTC AAAGGAAATT 1980 CCCCAGGTGG TGATGACTTT CAGCCTCATA CTACCTTGGG CTGGGGCCTG CTGAGGCTGC 2040 GGGACCTGGG AAGCAGGCTG AGCCCCGGGA GGTCAGGAGA CTGGCCACGC AGACCCAGGC 2100 CCACGAGAAG GCCACGCCTT GAGGACGGCT CCCTCCTCTG GTTCCATGAG GCCGGGACTG 2160 CGTGGCAGAG GATGGAGGAG GCGTGGGGCC TTGTCTTCAA GTTGTCGCTT GTGTTGTCAG 2220 CTTCCCCAGA AGCAATTGTG GTGAGGGGCC GCTGTGACTG ATGACGCTGA TTAGAAGCAG 2280 CGTCTTGTCT GTAGTTTTCA GAGTGATAAC TACAGAAAGA AAGAAGCAGA GGTTAAATGA 2340 TAAACATGTT CTTTGTTTTT TTATCAAATT AGGTGTCACA ATTGGGTGGG GGTGAGATTA 2400 TGGTTCTTTT TTGACAACGG TGCCTTGAGG TTCCTAAGTG ACTGGGCTTC CTGTCCCCAT 2460 TGCTCCCCGC TGCTTCTGGT AAATGGGTTT TAATGAACTA AGCAGCTGGC TGCGACTCCC 2520 TGGAGTTAGA CTGGAGGTCT CCACCCTGAC CCAGCAGGAA GCCATGCCCC CACCTGACCA 2580 CCGTGACCAC GGTGGGAGAA GGAAGGGGTT CTTGGGAGCA TCCACGTGGC TTATCTCTTT 2640 GATGATGCCA AATTCTCTGA CAAATTTAAC GATAGTGTTG GGTGGAAATT GGGGGCTCCT 2700 GATCGGAAGG GGAAGCCTCT CTCGTGTTTG CTTGGCTAAG GGGTTATCAG ATGTGCACCT 2760 GAGACACGCT GCTTCTGGGT TCCTTGTAAT CATCACTTTA TGAATTTGTG GATTGCTGTT 2820
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