| Tag | Content |
|---|
EnhancerAtlas ID | HS121-17576 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr17:80051650-80053190 |
Target genes | | Number: 35 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr17:80052448-80052463 | GAGGTCAAGAGATCG | + | 6 | | ZNF263 | MA0528.1 | chr17:80052801-80052822 | TGGGGAGGGTGGGAGGGGAGA | + | 6.26 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_25146 | chr17:80052937-80053387 | Colon_Crypt_3 | | SE_34333 | chr17:80050988-80052572 | HCT-116 | | SE_34333 | chr17:80052820-80060607 | HCT-116 | | SE_41582 | chr17:80051776-80052473 | LNCaP | | SE_41582 | chr17:80052879-80056184 | LNCaP | | SE_42885 | chr17:80052888-80058867 | Lung | | SE_68933 | chr17:80052708-80056211 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr17 | 80052713 | 80052821 | | chr17 | 80052026 | 80052157 | | chr17 | 80052233 | 80052336 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH17I082094 | chr17 | 80052713 | 80052821 | | GH17I082093 | chr17 | 80050989 | 80052572 |
|
Enhancer Sequence | CCACAAACAG TGGTCAAGGT GCCACGGCCG GGCCCCACAG CGCAGCCAGC CCACCCACCC 60
ACCCGGCTCT GGGGCGAAGG TCCCATCTTG GCCTCACTGG CTTGGGGTGA GGGGGGGTCC 120
ATCCCAGTGG GACCCTGGAA GGGGCCTAAG GAGGGTGAGG TGTCCTGCAG AGGGGCCAGA 180
ACAGAGCCTG TGGCCAGCAG CCAGCCCAGG TGAGGCCTGG AACAGGAACC AGGTCACAGA 240
GGGAACGAGG CGGAGGGGGC AGGCGGGCCC AGGGGAGGGC ACCAGGCACG GCCAGAGTGG 300
CTCCAGGAAG GACAGAGGGC AGCATTGTCC CCAGGCGACG CCTTTGGCCC CTGGTGTCAC 360
CGGCAGCTCT GATGAGCCCG TCGGCCAGTG GCCTCTCCAG CGCCAAGGGC AGCCTGCACC 420
AGAACAGGCC GTGATAAGGA ACCGAGGAGA CAAAGGCCAA GTGTCCAGGC TCGGGAAGGA 480
GAGAGGGACA CCGGTCACCC CCGGGGAGCA TAACCTTAGT CTTGGGGTGG GGTCTGGCAG 540
CAGGAAGGGC GCAGGAGAAG GGCTTCCACC TCTCGGCCAG CAGGGCCCCT CCTCGCCCCT 600
GGTGGGCTGG CTCTGCCCTA GGGTGGGTGG GTGTGTGAAC CGCTCACACC CAAGGGCAGC 660
CCAGGGCTCA GCCTCCCCCT CAGGAGGTCC TTCTCCGCCC GGGGAGGGAG CACCTGGATC 720
TTAAGAAATG GCATGGCTGG GCGTGGTGGC TCATGCCTGT AATCCCAGCA CTTTGGGAAG 780
CTGAGATGGA TGGATCACGA GGTCAAGAGA TCGAGACCAT CCTGGCAAAC ATGGTGAAAC 840
CCCATCTCTA CTAAAAATAC AAAAATTAGC CGGGCGTGGT GGTGGGCGCC TGTAGTCCCG 900
GCCACTCAGG AGACTGAGGC AGGAGAATGG TGTGAACCCA GGAGGCAGAG CTTGCAGTGA 960
GCTGAGATCG CGCCACTGCA CTCCAACCTG GTGACAGAGT GAGACTCCGT CTTAAAAATA 1020
AATAAATAAA TAAAAATAAA AATAAAAAAA CGGCGTGGCG CTTGTCCGAG GTCAAATGCC 1080
AGTCAGAGCG AGGGCCAGGC TGGCGGGAGA GGGTTGAAAT GCCTGGGGTG GGGGGACGTG 1140
GGCAAGGGTA GTGGGGAGGG TGGGAGGGGA GAGACAGCAG GGCCGGTGCT GTCCGCTGCT 1200
TGGCTGGTGG GGGTGGGGGC CTGGAGGGCC CCTCAAGAAC CTCCTGCTTT GCCTCTCGTC 1260
ACTCCAGCCC CGGCCCCGGC CCCAGCACCA GCCAGACATC AGAAGCGAGG AGACTGGTAC 1320
GCTCAGGTCA GGGCACACCC GCGACACCTC TGGGGTGCAG TTGGGAAACT GCGGCCTACC 1380
CCGTGGCCCA CACCTCCCTG AGCCCGTTGG CCAGGCCAGG GGCACAGCCG GGGAGGGTAG 1440
GTGGTGCCAG CACCTGGTTC TACCAGAACC AAGAAGAGAA AACACTGCCT ATTCCACGTG 1500
AGCAGCAGGA GCCCTCGGCG CAGCAGTCGC GAATGCCCGA 1540
|
