| Tag | Content |
|---|
EnhancerAtlas ID | HS121-15280 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr17:3658560-3659120 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| LMX1B | MA0703.2 | chr17:3658980-3658991 | TTAATTAAAAT | - | 6.62 | | Lhx3 | MA0135.1 | chr17:3658974-3658987 | AATTAATTAATTA | - | 6.78 | | Lhx3 | MA0135.1 | chr17:3658973-3658986 | AAATTAATTAATT | + | 6.92 | | MAFF | MA0495.3 | chr17:3659103-3659118 | GTGCTGAGTCAGCCA | + | 6.13 | | MAFF | MA0495.3 | chr17:3659103-3659118 | GTGCTGAGTCAGCCA | - | 6.15 | | POU6F1 | MA0628.1 | chr17:3658975-3658985 | ATTAATTAAT | + | 6.02 | | POU6F1 | MA0628.1 | chr17:3658975-3658985 | ATTAATTAAT | - | 6.02 | | ZNF263 | MA0528.1 | chr17:3658741-3658762 | TGCCCTTGCACTCCCTCCTCC | - | 6 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_30924 | chr17:3656180-3659648 | Fetal_Thymus | | SE_55227 | chr17:3658315-3658851 | Thymus | | SE_55227 | chr17:3659010-3659474 | Thymus |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I003754 | chr17 | 3657586 | 3659400 |
|
Enhancer Sequence | GGGGACGGGG ATGGGGCCCA GATGAGTGGG AGGGACCCAA GGCCGGGCCA CGGTGGCCGC 60
GGGTCTCCGG GCCAGCGCGG CTAACCTGGC TGGGAGCAGG GGGGCGTTCG GTGGTCTAGT 120
GCCCGCCTGG CCAGAGATGC AGGCGGGAAG GTGAGATGGC CAACACTGGG CTCCTGCCTC 180
GTGCCCTTGC ACTCCCTCCT CCGGGAGAAG CAAGCAGCTT GGTTGATAAG CTGACCCAGG 240
CCGAGTCCTG TTGCCTGGTC TGTATTCAGG GGAACAACTG GATGTTTGAG CACACAGAAA 300
AAAGCGACCT CCTGTCATCA ATATGGCCAC CCTTTTGTTG CAGTGAGCCG AGACTGCACC 360
GCTGCACTCC AGACTGGGCG ACAGAGCAAG ACTCCGTCTC AAAATAAATA AATAAATTAA 420
TTAATTAAAA TAAAATCGCT CTTTTACAGG AATCACCACA GGTAGGGCAG AGCCCTGGAT 480
GGGAGGCAGG AGTCCCTGAA TCCTAGGTGT CCTGGGCCCC TCACCAATGG GCAAGCCTGC 540
CTGGTGCTGA GTCAGCCACG 560
|
