Tag | Content |
---|
EnhancerAtlas ID | HS121-15038 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr16:89389740-89390640 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ZIC1 | MA0696.1 | chr16:89390579-89390593 | CACGGCGGGGGGTG | - | 6.09 | ZIC3 | MA0697.1 | chr16:89390578-89390593 | TCACGGCGGGGGGTG | - | 6.42 | ZIC4 | MA0751.1 | chr16:89390578-89390593 | TCACGGCGGGGGGTG | - | 6.07 | ZNF263 | MA0528.1 | chr16:89390151-89390172 | ACTCTCTCTCCTTCCTCCTCA | - | 6.35 | ZNF263 | MA0528.1 | chr16:89390185-89390206 | TCTCTCTCCTTCCCCTCCTCA | - | 7.19 | Zfx | MA0146.2 | chr16:89390501-89390515 | CCGGCCTCGGCCTC | + | 6.28 |
|
| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_02489 | chr16:89387851-89393272 | Astrocytes | SE_08034 | chr16:89390068-89393477 | Brain_Inferior_Temporal_Lobe | SE_09347 | chr16:89388050-89391249 | CD14 | SE_18559 | chr16:89389663-89395055 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19583 | chr16:89389803-89393211 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_34421 | chr16:89385122-89393975 | HCT-116 | SE_38261 | chr16:89387926-89390083 | HUVEC | SE_38261 | chr16:89390433-89394272 | HUVEC | SE_40947 | chr16:89384396-89389869 | Left_Ventricle | SE_40947 | chr16:89389875-89393603 | Left_Ventricle | SE_41566 | chr16:89388694-89389892 | LNCaP | SE_41566 | chr16:89389976-89391098 | LNCaP | SE_42507 | chr16:89385360-89393995 | Lung | SE_44388 | chr16:89388190-89389839 | NHDF-Ad | SE_44901 | chr16:89387908-89390095 | NHLF | SE_44901 | chr16:89390361-89393629 | NHLF | SE_46181 | chr16:89387914-89395059 | Osteoblasts | SE_47239 | chr16:89379571-89402946 | Panc1 | SE_47827 | chr16:89389452-89389857 | Pancreas | SE_65322 | chr16:89385419-89393636 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr16 | 89389971 | 89390018 | chr16 | 89390391 | 89390441 | chr16 | 89389872 | 89389940 |
|
Enhancer Sequence | GGTATGGAAG AGAAGCACCA CTGGCCTCTC ACCTCTCACC ATCTCAGTGG GCAAGGGGAG 60 AGCAAGCAGC CCAGGGCAGG GGGGCTGAGC CGAGGGCAGG GGGGCTGAGC CGAGGGCAGG 120 GGGGCAGAGC CGAGGGCAGG GGGGCAGAGC CCAGGGCAGG GGGGCAGAGC CCAGGGCAGG 180 GGGGCTGAGC CGAGGGCAGG GGGGCTGAGC CGAGGGCAGG GGGTCTGAGC TAAGGGCACG 240 GGGGCTAAGC CCAGGGCAGG GGGGCTGAGC CCGGGGCAGG GGAAGAGCCG AGGGACAGAG 300 GCCCTCACAG GAACCAGGCC CTCCCGCACA CCGCCTGACA GTCCACGTCA GCGTCTCTGT 360 CCAGCCTCCA CACACCCCTG CACGTTCTGA AGAGCCCTCC CCAAGAGTCC AACTCTCTCT 420 CCTTCCTCCT CAGGGCCGCA CCAGCTCTCT CTCCTTCCCC TCCTCAGGGC CACACCAACT 480 GTGGGGTTCC AGCTATCACT CTGTGCAAAG GACTCCTAAC ATGGGTGTCC TCCGTCTCAC 540 CCCATAAGCC ACACTGGCCA AGGCCAGGCA GGCACCACAC ATCGCGAGGT AGAATCTCTT 600 TGCTACGGTT TGAATGTTTG TGTCGGCCCC TCCCCTGCAC CCCAAAATTC ACAGGTTCAA 660 ACCAAACCCC CAGTGTGCCC AGCTACTTTT TGTATTTTTG GTAGAGACAG GGTTTCACCA 720 TGTTGGCCAG GGTGGTCTCC ATCTCTTGAC CTCATGATCT GCCGGCCTCG GCCTCCCAAA 780 GTGCCCCACG GCACAACGCT CTCTACTGCA GCCCTGTTTC CACTCACATT TTCTGTTATC 840 ACGGCGGGGG GTGGCAGCAC CGAGAGCGCG TTCAGCATTA CTGGCCTCTG CTTTGCCCCT 900
|