| Tag | Content |
|---|
EnhancerAtlas ID | HS121-13064 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr16:138890-139710 |
Target genes | | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| PPARG | MA0066.1 | chr16:138899-138919 | ATGGGTCAGGGTGACCAAGT | + | 7.4 | | ZEB1 | MA0103.3 | chr16:139207-139218 | GGGCAGGTGGG | - | 6.14 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_04633 | chr16:138796-139876 | Brain_Anterior_Caudate | | SE_06370 | chr16:139571-144723 | Brain_Hippocampus_Middle | | SE_08616 | chr16:139396-144623 | Brain_Inferior_Temporal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH16I000088 | chr16 | 138797 | 139876 |
|
Enhancer Sequence | GTGGGGGACA TGGGTCAGGG TGACCAAGTG GAATTCCAGG ACACCCAGGG GAACAGCGAG 60
GGCAGAGCCA GCAGCCAGCC TCCAATGACA CCCCTAACTC CTACAAGGGT TAGGGTACAT 120
CTGCCTGCAA GCATTCGCTG CTGCCCCACC TCCTGGGTGT GACACGCCCC TCATACGGCT 180
GACTTGGGAA ACGGGTAGCC TCCCCTCTGG GGGCAACCTC AAGGGACCTG AACAGAGGTG 240
CGATGTGTGC CCCACAAACA CCCCAAGGTG GGCCTGGGCA TCCTGTCCCT CACCCAGGAT 300
GGAGGACAAA GCACCCTGGG CAGGTGGGGT CCTCACATGA AGCATGAAGC CTACAGCCAG 360
ACCTCAGCCA AGGGGGGACT TTCAAAGTCT TCCACCCCCT TCCTTCCCCA AGCCTGGGGA 420
CCGGGGACCT GGGACCTGGC AACAGGCTGC TGCCCTCAAG CCACACTGGC CATGACGGCT 480
CTTCTGGGGC GCAGAGGTGT CAGCTGTCCT GGTAGTGGTA TGAGATCCTG CTCTGCTCCC 540
AGGCTGGGGC AGAGATTCCA GCACTGATTT GCTGGGCTGG GAGCTGCCCC TAATTCTAGC 600
AAGCCTGCTG AAGAGCCCGG AGACAGAGCT GCCACCTCAG AGTCACGGTG GTGCTAGGAG 660
ACAGGAGAGG TGTCTCCACG GGGGACACGA GGCACGTGCA TGTGCGTGTG CAGCTGTGTG 720
GAGGCCCCTC ATCACTCACA GCACCACCCA CGTTGAGCCT CCTGGATGCC ACCCCCAAGC 780
GTCTCCCCTG ACTACCACAG CGGTGCCCTG GGGGTCCTAC 820
|
