| ALX3 | MA0634.1 | chr12:132878752-132878762 | TTTAATTAGA | - | 6.02 |
| EWSR1-FLI1 | MA0149.1 | chr12:132879328-132879346 | GCCAGGAGGGCAGGAAGG | + | 6.09 |
| EWSR1-FLI1 | MA0149.1 | chr12:132893060-132893078 | CCTTGCTTCCTTCCTCCC | - | 8.32 |
| FOXA1 | MA0148.4 | chr12:132894519-132894535 | GTTTATTTACTTAAAA | - | 6.08 |
| FOXP1 | MA0481.2 | chr12:132897142-132897154 | CAGTAAACAGAA | + | 6.02 |
| Foxd3 | MA0041.1 | chr12:132884420-132884432 | AAACAAACAAAC | - | 6.32 |
| Gfi1b | MA0483.1 | chr12:132887175-132887186 | GGCTGTGATTT | - | 6.02 |
| HSF1 | MA0486.2 | chr12:132864864-132864877 | TTCTGGAATATTC | + | 6.48 |
| IRF1 | MA0050.2 | chr12:132893012-132893033 | AAAAGGAAAAAGAAAGAAAAG | - | 6.88 |
| JUN | MA0488.1 | chr12:132886073-132886086 | AAGATGAGGTCAT | + | 6.54 |
| JUND(var.2) | MA0492.1 | chr12:132886072-132886087 | CAAGATGAGGTCATC | + | 6.27 |
| KLF4 | MA0039.3 | chr12:132893940-132893951 | CCACACCCTCT | + | 6.02 |
| Klf1 | MA0493.1 | chr12:132893938-132893949 | GGCCACACCCT | + | 6.32 |
| Mafb | MA0117.2 | chr12:132894801-132894813 | AAAATGCTGACA | + | 6.62 |
| Myod1 | MA0499.1 | chr12:132891274-132891287 | GGGGGCAGCTGCT | - | 6.03 |
| Myog | MA0500.1 | chr12:132900501-132900512 | CTGCAGCTGTC | - | 6.62 |
| NFIA | MA0670.1 | chr12:132878682-132878692 | GGTGCCAAGT | + | 6.02 |
| Nr2f6(var.2) | MA0728.1 | chr12:132863508-132863523 | TGAACTCCTGACCTC | - | 6.22 |
| PLAG1 | MA0163.1 | chr12:132864328-132864342 | GGTGCCCAAGGGGG | + | 6.39 |
| REST | MA0138.2 | chr12:132866658-132866679 | GTTCCTGGCCATGGTGCTTCA | - | 6.36 |
| REST | MA0138.2 | chr12:132878080-132878101 | GTCCCTGTCCATGGGGCTGCC | - | 6.54 |
| REST | MA0138.2 | chr12:132878336-132878357 | TTCATGACCCTGGACAGGGCA | + | 6.58 |
| RREB1 | MA0073.1 | chr12:132887005-132887025 | CCACCCAACAGCCCCACCCA | + | 6.31 |
| RREB1 | MA0073.1 | chr12:132890248-132890268 | CACCCATCCACCCACCCACC | + | 6.32 |
| RREB1 | MA0073.1 | chr12:132890563-132890583 | CCACCCATCACCCACCCACC | + | 6.79 |
| Tcf12 | MA0521.1 | chr12:132900501-132900512 | CTGCAGCTGTC | - | 6.14 |
| ZEB1 | MA0103.3 | chr12:132883171-132883182 | CCCACCTGCCC | + | 6.14 |
| ZEB1 | MA0103.3 | chr12:132889805-132889816 | CCCACCTGCCC | + | 6.14 |
| ZIC3 | MA0697.1 | chr12:132901135-132901150 | TGGCAGCGGGGGGTC | - | 6.12 |
| ZIC4 | MA0751.1 | chr12:132901135-132901150 | TGGCAGCGGGGGGTC | - | 6.24 |
| ZNF263 | MA0528.1 | chr12:132894362-132894383 | AGGGCAGGGAAAGAAGGAGGA | + | 6.24 |
| ZNF263 | MA0528.1 | chr12:132868357-132868378 | TCCTTTCCTCCCCCCTGCTTC | - | 6.65 |
| ZNF263 | MA0528.1 | chr12:132869359-132869380 | GAAGGAGGGTGGGGAGAGGGT | + | 6.78 |
| ZNF263 | MA0528.1 | chr12:132897232-132897253 | GGTGGAGGAGGTGGAGGGAAG | + | 7.2 |
| ZNF740 | MA0753.2 | chr12:132863645-132863658 | CCCCCCCCCCCCC | + | 6.03 |
| ZNF740 | MA0753.2 | chr12:132863646-132863659 | CCCCCCCCCCCCC | + | 6.03 |
| ZNF740 | MA0753.2 | chr12:132863647-132863660 | CCCCCCCCCCCCC | + | 6.03 |
| ZNF740 | MA0753.2 | chr12:132863642-132863655 | GCGCCCCCCCCCC | + | 6.1 |
| Zfx | MA0146.2 | chr12:132899287-132899301 | CAGGCCTGGGCGGC | - | 6.75 |
