| DUX4 | MA0468.1 | chr12:102426654-102426665 | TAATCTAATCA | + | 6.32 |
| EBF1 | MA0154.3 | chr12:102422875-102422889 | ATTCCCAAGGGATT | - | 6.62 |
| EBF1 | MA0154.3 | chr12:102422875-102422889 | ATTCCCAAGGGATT | + | 6.96 |
| ESRRB | MA0141.3 | chr12:102427648-102427659 | TCAAGGTCATA | + | 6.62 |
| Esrra | MA0592.2 | chr12:102427647-102427658 | CTCAAGGTCAT | + | 6.02 |
| Esrrg | MA0643.1 | chr12:102427648-102427658 | TCAAGGTCAT | + | 6.02 |
| Foxo1 | MA0480.1 | chr12:102428523-102428534 | TGTAAACAGCA | - | 6.14 |
| Nr2f6(var.2) | MA0728.1 | chr12:102429921-102429936 | GAGGTCAGGAGTTCA | + | 6.22 |
| PAX6 | MA0069.1 | chr12:102425832-102425846 | TTCATGCTTGACTG | + | 6.12 |
| PROP1 | MA0715.1 | chr12:102420899-102420910 | TAATCAAATTA | + | 6.02 |
| RARA | MA0729.1 | chr12:102424214-102424232 | CAATGACCTTTTCTCCTC | - | 6.88 |
| RUNX1 | MA0002.2 | chr12:102429819-102429830 | GTTTGTGGTTT | + | 6.02 |
| SPIC | MA0687.1 | chr12:102433469-102433483 | GACTTCCTTTTTTT | - | 6.02 |
| Stat6 | MA0520.1 | chr12:102433190-102433205 | ATTTCTCAGGAAAAA | - | 7.52 |
| TCF3 | MA0522.2 | chr12:102426394-102426404 | AGCAGGTGTT | - | 6.02 |
| Zfx | MA0146.2 | chr12:102431816-102431830 | CCCGCCTCGGCCTC | + | 6.01 |
