| Tag | Content |
|---|
EnhancerAtlas ID | HS121-08662 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr12:51733790-51735020 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr12:51734162-51734183 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_05159 | chr12:51734595-51735743 | Brain_Cingulate_Gyrus | | SE_06229 | chr12:51734596-51735963 | Brain_Hippocampus_Middle | | SE_08314 | chr12:51734559-51735787 | Brain_Inferior_Temporal_Lobe | | SE_20712 | chr12:51734662-51735438 | CD56 | | SE_22905 | chr12:51734601-51735580 | CD8_primiary | | SE_59549 | chr12:51734714-51764347 | Ly3 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I051341 | chr12 | 51734909 | 51735930 |
|
Enhancer Sequence | TGAACAGGAC ACACGGCATT GGCAGTCAGC TCCAGATGTG GTCCAGCAGA AAAACCTTCC 60
ACCCCTGCCA CACCTTCCCA AACTCTCGTG AAAGCTGAGC TCAGGGCAAA CTCCTTCTCT 120
CTCCCTGTTG CATGTGGTGG ATCCTCTGTC TTCTCTCTTT ATATGGCCGC ACAGGACCCT 180
TCCCTCAGGG AGGCAGCCTT GCTTACTGTA CCTAGGCTCC AAGCCACCAA CCCTACTCCT 240
GCTTCTTTTC ACTCGTGGAT AACTTAGTTG CACCATGGAA TGGCCTTATT TGTGGATGAT 300
TTATCTGTCT GTTCTGTTTG CTCCTGCAAG CTCCATGGAG CAGAAATGGG ATTGTGCATG 360
CTTGTTTCCA TTTCTTTCTT TCTTTTTTTT TTTTTTTTTT GAGATGGAGT TTCACTCTTG 420
TTGCCCAGGC TGGAGTGCAA TGGAGCAATC TCGGCTCACC ACAACCTCCG CCTCCCAGGT 480
TCAAGAGATT CTCCTGCCTC AGCCTGCCGA GTAGCTGGGA TTAAAGGCAT GCACCACCAT 540
GCCTGGCTAA TTTTGTATTT TTAGTAGAGA TGGGGTTTCT CCATGTTGGT CAGGCTTAAG 600
CGATCCTCCT TCCTCAGCCT CCTGAGTACC TGGGACTACA GACTCATGCC ACCACACTCA 660
GCTAAGGATC CTTAATTTCT CTGGACCTTG GTTTCCTCAT GTATAAAATG AAGGGCTGGC 720
TGGCTGCAGT GGCACATGCC TGTAATCCCA GCACTTTGGG AGGCCAAGGT GGGAGGATTT 780
CTTAAGCTCA GGAGTTCGAG GCCAGCCTAG GCAATATAGC GAGATCCCAT CTCTACAAAA 840
AAATTTAAAA ATTAGCTGAG TGTGGTGGTA CATGCCTATA GTCTCAGCTA CTCAGGAGGC 900
TGAGGTGGGA GGATCACTTG AGCCCAGGAA GTGGAGGTTG CAGCCTGGGT GACAGAGCAA 960
AACCCTGTCT CTAAATAAAT AAATAAATTT TAAAAATGAG GGGCTGGTAA AAAAAATTCT 1020
CTGATAAAGT CTTTTTTTGT TCTAAGAGTC CATGAATCTG TCAACTACTT CACAGCCCAT 1080
TCTTAGCTTG ATATAATGCA TCAGTTATTG TATCTATGGT TCTTTTAGCT CCTGGTCTCT 1140
GGCCATAAGC ACCTAGGACC ACAGAAAAAG GTGTCTTAGA AGCTCAGCTA CCTAATCAAG 1200
ATCCCCGTGG TGGATTGTGC CAATGTAGGC 1230
|
