| ALX3 | MA0634.1 | chr11:100767569-100767579 | TTTAATTAGA | - | 6.02 |
| Atoh1 | MA0461.2 | chr11:100761895-100761905 | AACATATGTT | + | 6.02 |
| Atoh1 | MA0461.2 | chr11:100761895-100761905 | AACATATGTT | - | 6.02 |
| Crx | MA0467.1 | chr11:100738469-100738480 | AAGAGGATTAG | + | 6.62 |
| Crx | MA0467.1 | chr11:100778541-100778552 | CTAATCCTCTT | - | 6.62 |
| DUX4 | MA0468.1 | chr11:100776084-100776095 | TGATTAGATTA | - | 6.32 |
| ESRRB | MA0141.3 | chr11:100746918-100746929 | TTTGACCTTGA | - | 6.14 |
| EWSR1-FLI1 | MA0149.1 | chr11:100775314-100775332 | CTTTTCTTTCTTTCTTCC | - | 6.06 |
| Esrra | MA0592.2 | chr11:100746919-100746930 | TTGACCTTGAA | - | 6.14 |
| FOS | MA0476.1 | chr11:100736364-100736375 | AATGAGTCACA | - | 6.62 |
| FOXA1 | MA0148.4 | chr11:100752085-100752101 | TTTTGTTTACTTTATC | - | 6.53 |
| FOXC1 | MA0032.2 | chr11:100744412-100744423 | ATATTTACTTA | - | 6.14 |
| FOXP1 | MA0481.2 | chr11:100764551-100764563 | CAGTAAACAGAA | + | 6.02 |
| FOXP1 | MA0481.2 | chr11:100733923-100733935 | TCCTGTTTACTT | - | 6.07 |
| FOXP2 | MA0593.1 | chr11:100752086-100752097 | TTTGTTTACTT | - | 6.62 |
| Foxa2 | MA0047.2 | chr11:100733926-100733938 | TGTTTACTTAGG | + | 7.22 |
| Foxd3 | MA0041.1 | chr11:100733877-100733889 | AAATAAACATAC | - | 6.11 |
| Foxd3 | MA0041.1 | chr11:100732562-100732574 | AAACAAACATTT | - | 6.27 |
| Foxd3 | MA0041.1 | chr11:100752563-100752575 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100752567-100752579 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100752571-100752583 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100752575-100752587 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100752579-100752591 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100770405-100770417 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100770409-100770421 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr11:100770413-100770425 | GTTTGTTTGTTT | + | 6.32 |
| Foxo1 | MA0480.1 | chr11:100733923-100733934 | TCCTGTTTACT | + | 6.32 |
| Foxq1 | MA0040.1 | chr11:100755198-100755209 | AATAAACAATA | - | 6.62 |
| Gfi1b | MA0483.1 | chr11:100743005-100743016 | AAATCTCAGCA | + | 6.32 |
| HLTF | MA0109.1 | chr11:100739053-100739063 | ATATAAGGTT | - | 6.02 |
| HNF1A | MA0046.2 | chr11:100730788-100730803 | TGTTAATGTTTAATT | - | 6.48 |
| HNF1A | MA0046.2 | chr11:100776112-100776127 | CTTTAATAATTAACT | + | 6 |
| HNF1B | MA0153.2 | chr11:100776113-100776126 | TTTAATAATTAAC | - | 6.14 |
| HOXA13 | MA0650.2 | chr11:100741793-100741804 | GTTTTATTGGG | - | 6.62 |
| IRF9 | MA0653.1 | chr11:100748883-100748898 | AGTTTCACTTTTGTT | - | 6.15 |
| KLF4 | MA0039.3 | chr11:100755948-100755959 | ACAGGGTGTGG | - | 6.14 |
| KLF4 | MA0039.3 | chr11:100731107-100731118 | CCACACCCTCC | + | 6.32 |
| LMX1B | MA0703.2 | chr11:100763000-100763011 | TTAATTAAAAT | - | 6.62 |
| Lhx3 | MA0135.1 | chr11:100764441-100764454 | TAATAATTAATTT | - | 6.25 |
| Lhx3 | MA0135.1 | chr11:100761485-100761498 | AGTTAATTAATTT | - | 6.74 |
| Lhx3 | MA0135.1 | chr11:100762924-100762937 | AAATTAATTATTC | + | 7.34 |
| MEOX1 | MA0661.1 | chr11:100757088-100757098 | GCTAATTAAC | + | 6.02 |
| MNX1 | MA0707.1 | chr11:100745074-100745084 | GGTAATTAAA | + | 6.02 |
| MNX1 | MA0707.1 | chr11:100746520-100746530 | GGTAATTAAA | + | 6.02 |
| Mafb | MA0117.2 | chr11:100745777-100745789 | AAACTGCTGACT | + | 6.22 |
| Myog | MA0500.1 | chr11:100758445-100758456 | CTGCAGCTGTC | - | 6.62 |
| NFAT5 | MA0606.1 | chr11:100751088-100751098 | ATTTTCCATT | + | 6.02 |
| NFAT5 | MA0606.1 | chr11:100764848-100764858 | AATGGAAAAT | - | 6.02 |
| NFATC1 | MA0624.1 | chr11:100751088-100751098 | ATTTTCCATT | + | 6.02 |
| NFATC1 | MA0624.1 | chr11:100764848-100764858 | AATGGAAAAT | - | 6.02 |
| NFATC3 | MA0625.1 | chr11:100751088-100751098 | ATTTTCCATT | + | 6.02 |
| NFATC3 | MA0625.1 | chr11:100764848-100764858 | AATGGAAAAT | - | 6.02 |
| NFKB1 | MA0105.4 | chr11:100772571-100772584 | AGGGAAATCCCCT | - | 6.15 |
| NFKB1 | MA0105.4 | chr11:100772571-100772584 | AGGGAAATCCCCT | + | 6.1 |
| Nkx3-2 | MA0122.3 | chr11:100741786-100741799 | TTTAAGTGTTTTA | - | 6.33 |
| Nr2f6(var.2) | MA0728.1 | chr11:100754292-100754307 | TGATCTCTTGACCTC | - | 7.23 |
| PBX1 | MA0070.1 | chr11:100770704-100770716 | ATTGATTGATGT | - | 6.44 |
| PHOX2A | MA0713.1 | chr11:100767438-100767449 | TAATTGAATTA | - | 6.14 |
| POU2F2 | MA0507.1 | chr11:100779687-100779700 | TTAATTTGCATTT | + | 6.25 |
| PRDM1 | MA0508.2 | chr11:100752405-100752415 | TCACTTTCAC | + | 6.02 |
| PRDM1 | MA0508.2 | chr11:100734267-100734277 | GTGAAAGTGA | - | 6.02 |
| Phox2b | MA0681.1 | chr11:100767438-100767449 | TAATTGAATTA | - | 6.14 |
| RARA | MA0729.1 | chr11:100752768-100752786 | CAGTGACTGTTTGACCTC | - | 6.09 |
| REL | MA0101.1 | chr11:100772573-100772583 | GGAAATCCCC | - | 6.02 |
| RREB1 | MA0073.1 | chr11:100733783-100733803 | ACACAAAACACACACACACA | + | 6.71 |
| RUNX1 | MA0002.2 | chr11:100771747-100771758 | CTCTGTGGTTT | + | 6.14 |
| RUNX1 | MA0002.2 | chr11:100746885-100746896 | AAACCACAGAA | - | 6.32 |
| SOX10 | MA0442.2 | chr11:100767414-100767425 | TTCTTTGTTTT | - | 6.62 |
| SPI1 | MA0080.4 | chr11:100737382-100737396 | CAAAAGGGGAAGTG | + | 6.41 |
| SPI1 | MA0080.4 | chr11:100768529-100768543 | GACTTCCTCTTTTC | - | 6.63 |
| SPIB | MA0081.2 | chr11:100737384-100737396 | AAAGGGGAAGTG | + | 6.07 |
| SPIC | MA0687.1 | chr11:100774956-100774970 | TACTTCCTATTTTT | - | 6.29 |
| SPIC | MA0687.1 | chr11:100768529-100768543 | GACTTCCTCTTTTC | - | 6.73 |
| SREBF2 | MA0596.1 | chr11:100764692-100764702 | ATCACCCCAT | - | 6.02 |
| STAT1 | MA0137.3 | chr11:100740248-100740259 | TTTCCTAGAAA | - | 6.14 |
| Sox3 | MA0514.1 | chr11:100770507-100770517 | CCTTTGTTTT | + | 6.02 |
| Spz1 | MA0111.1 | chr11:100771400-100771411 | GCTGATACCCT | - | 6.32 |
| Stat4 | MA0518.1 | chr11:100740245-100740259 | ACATTTCCTAGAAA | - | 6 |
| TEAD1 | MA0090.2 | chr11:100752441-100752451 | ATGGAATGTG | - | 6.02 |
| TFAP2A | MA0003.3 | chr11:100773908-100773919 | TGCCTCAGGCA | + | 6.02 |
| Tcf12 | MA0521.1 | chr11:100758445-100758456 | CTGCAGCTGTC | - | 6.14 |
| ZNF263 | MA0528.1 | chr11:100783000-100783021 | CCTTCTTTCCCTTCCACCACC | - | 6.09 |
| ZNF263 | MA0528.1 | chr11:100732722-100732743 | AAAGGAGGCTGAGAAGGAAGG | + | 6.22 |
| ZNF263 | MA0528.1 | chr11:100737360-100737381 | AGAGCAGGAGGAAGAGAGAGA | + | 6.78 |
| Zfx | MA0146.2 | chr11:100775221-100775235 | CCCGCCTCGGCCTC | + | 6.01 |
