| Tag | Content |
|---|
EnhancerAtlas ID | HS121-05354 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr10:104415070-104415860 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| USF1 | MA0093.2 | chr10:104415663-104415674 | GGTCACGTGGC | - | 6.62 | | USF2 | MA0526.2 | chr10:104415660-104415676 | CTGGGTCACGTGGCAA | + | 6.54 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_05850 | chr10:104401220-104419012 | Brain_Hippocampus_Middle | | SE_24984 | chr10:104415753-104416276 | Colon_Crypt_3 | | SE_31421 | chr10:104414163-104415403 | Gastric | | SE_31421 | chr10:104415469-104421974 | Gastric | | SE_42120 | chr10:104415488-104421991 | Lung | | SE_50092 | chr10:104415581-104419489 | Sigmoid_Colon | | SE_62334 | chr10:104369841-104439105 | Tonsil | | SE_65286 | chr10:104415474-104419749 | Pancreatic_islets |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH10I102655 | chr10 | 104415754 | 104416276 | | GH10I102654 | chr10 | 104414041 | 104415403 |
|
Enhancer Sequence | GTGGGCTGGG CTCAGGACCA GGCTGGTGGC ACCCAGAGGG CCATTTCCAA ATTGAGATCT 60
GCAGTTTCCT GCACCTGTAG CTCACATGCC CTTACCTTTG GAGCCAGCAT GCATGGGTTC 120
AAATCCACCT GCCTGCTCTT TCTAGCACTG TGACCTTGGG CAAGTCATAG GTACATCCCG 180
GGCCTTGTTC CCTCACCTAC GAAGTGGTGT TGATGATACA GGTCTACTAT TCTTTATCCA 240
CAATTCCACA TTTATAAACA TCTCTGGAAA CTAAACAAAT TTTGGCATCT AATTTAACAG 300
CAAAAATTGA CCTAAACTGA TGTTAGGCAA TTTATGGTCT TTATCTTGCT TAGTATGAAA 360
ATTCAAACAT TTTGCTGCAG AAATGTTGCT GTATTAGATT GTTGTGTCTT GCTGGGGATG 420
ATAATGTAAT ATATGATACA GGCACTGTAT TCTCCGTCTA AAATCCAAAA AATTCCAAAT 480
TCCAAAACAC ATCTGGCCCC AAAGACTTGA GCTAAAACAG TGTGGGCCTG CAGAGCCCTT 540
CTCCTCGGGT ATGGATGAAG TTATGGATGC ACAGAAAGCA CTTACAATGC CTGGGTCACG 600
TGGCAAGAGC TCAGTAAATG TTAGCTCTTC TTCCGCAAAT GGCCACCCCT ACCCCTGCCA 660
CTTTCTGTCC AGAATGAGAG GATCCACCCA GCCTGGGGGA GGCTCAGGGG GGGCAGCTTT 720
TGTCTTCCCC TCTCCCCGGG CTCTCCCTGG ACTGCCTTTT CCACTGACTT GACTCTTTTC 780
TCTCCCCAAC 790
|
