| Tag | Content |
|---|
EnhancerAtlas ID | HS121-03927 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:226032320-226032840 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ZIC1 | MA0696.1 | chr1:226032774-226032788 | AACCCCCTGCTGTG | + | 6.46 | | ZIC3 | MA0697.1 | chr1:226032774-226032789 | AACCCCCTGCTGTGC | + | 6.65 | | ZIC4 | MA0751.1 | chr1:226032774-226032789 | AACCCCCTGCTGTGC | + | 6.28 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_00381 | chr1:226031788-226034112 | Adipose_Nuclei | | SE_00960 | chr1:226031735-226034952 | Adrenal_Gland | | SE_04103 | chr1:226029441-226032610 | Brain_Anterior_Caudate | | SE_04909 | chr1:226029288-226038857 | Brain_Cingulate_Gyrus | | SE_05837 | chr1:226029277-226050904 | Brain_Hippocampus_Middle | | SE_06795 | chr1:226029431-226048398 | Brain_Hippocampus_Middle_150 | | SE_07978 | chr1:226029263-226032926 | Brain_Inferior_Temporal_Lobe | | SE_43041 | chr1:226031651-226032743 | Lung |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I225837 | chr1 | 226025565 | 226032926 |
|
Enhancer Sequence | AGCGGTGAGC CTGGCTGAGC CGAGAACAGG GGCCTCTGAG GCTGGAGGCA GGGGGACGGC 60
CAGTCTTGGG CTCCACGAAG GGCACTTGGT GGTGGGATAA GTATAGCCTT GCCTGCAGGT 120
GCCCCAGGGG CCCTTGGATG GGAACACTAA AGGTCGAGGT GTTTGGAGAA AGCCCTCATG 180
GAGGGACCAG GTGCCTGGCT CCCGGGCGGC CCTCAGTACC GCTCCCCAGT CTAGGATGCT 240
GGTCTGGAGT GGCACTGATG GTTCTGGGAT TTCCAAGTCT CACATGGAAA CCCTCAAAGG 300
TGGGGATTTA GAGGCTGTCC CATGCCCCTG CCTGGGTGGC CCTCCCAGAA AAGAGAAGGC 360
CCTCAGTGAG GGGAGAGCGG TTGAGACCCT GGATTTGTCC TTTTCTTTAT GGCTCCTTGT 420
GGGTGGGCCA GCTGATCTCA CCCCCAGGCG CTTTAACCCC CTGCTGTGCA GGACGGAGGG 480
GCGCAGGGCC ACAGCCTCAC CCCTCCGTCG GCTCTTTCAC 520
|
