EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS121-03647

Organism

Homo sapiens

Tissue/cell

LNCaP

Coordinate

chr1:205589970-205592800

Target genes

Number: 9
Name	Ensembl ID

MFSD4	ENSG00000174514
RP11	ENSG00000236942
ELK4	ENSG00000158711
SLC45A3	ENSG00000158715
SNORA72	ENSG00000201944
NUCKS1	ENSG00000069275
RAB7L1	ENSG00000117280
SLC41A1	ENSG00000133065
PM20D1	ENSG00000162877

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXC1	MA0032.2	chr1:205591847-205591858	ATATTTACTTA	-	6.14
Foxd3	MA0041.1	chr1:205591341-205591353	AAACAAACAAAC	-	6.32
IRF1	MA0050.2	chr1:205591352-205591373	CAAAAAAAAGTGAAAGAAATT	-	6.71
NFIL3	MA0025.1	chr1:205590508-205590519	ATGTTACATAA	-	6.32
NKX2-5	MA0063.2	chr1:205591607-205591617	ACCACTTGAG	+	6.02
Nkx3-2	MA0122.3	chr1:205591036-205591049	TCAACCACTTAAT	+	6.1
Nr2f6(var.2)	MA0728.1	chr1:205591123-205591138	GAGGTCAGGAGTTCA	+	6.22
Nr2f6(var.2)	MA0728.1	chr1:205590865-205590880	TGAACTCCTGACCTC	-	6.22
Nr2f6(var.2)	MA0728.1	chr1:205592661-205592676	TGAACTCCTGACCTC	-	6.22

Enhancer Sequence

AGGTTAAAAA AAAAAGCATT TTTATCCTTT CTTATAAACT TATATCCCAT AGTTCATGAA 60
AAAGCTGGCA TCGGCCAGGC ACAGTGGCTC ATGCCTGTAA TCCCAGCACT TTGGAAGGCC 120
GAGGAGGGCG GATCACGAGG TCAGGAGATT GAGACCAGCC TGGCCAACAT GGTGAAACCC 180
CGTCTCCACT AAAACAGAAA AAATTTGCAG GGCATGGTGG CGTGCGCCTG TAGTCCCAGC 240
TACTCAGGAG GCCGAGGCAG GTGAATCCCT TGAACCCGGG AGGCGGAGGT TGCAGTGAGC 300
CAAGATCACA CCACTGCACT CCAGCCTGGT GACAGAGCAA GAGTCTGTCT TAAAAAAAAA 360
AAAAAAAAAA AAAAAAAGAA AAAGCTGGTA ATGAGGTTCT CCATTTTAGA AGTAGACATC 420
ACTTACTTAA AACTTTCAAA ATCACCTAAA TTCATCTAGC CATACCAAAC ACAGTCCCTA 480
CTATTATGGA GAAGTTAAGG CAAGAACATT TAAATGTCTT ATTAACAACT GAACTAATAT 540
GTTACATAAA AACTGAAGGA TTTTAATTGC TTACCACTCT CAACCAAATA TCTGTGCAGA 600
TTAGAACTCC CTGAACTGCA GTCTCAAACA ATTCCAAAGG TATAAGCCAT ACACATCCTG 660
AGTAAGCAAA AAGGAATTTA TTTACTTATT TTTTTGAGAT GGAGTCTCAC TCTGTCACCC 720
AGGCTGGAGT GCAGTGGTGT GATCTCAGCT CACTGCAACC TCTGCCTCCT GGGTTCAAGC 780
AATTCTCCTG CCTCAGCCTC CCAAGTAGGT GGGATTATAG GCACACATCA CCATGCCCAG 840
CTAATTTTGT ATTTTTAGTA GAGATGGGGT TTTGCCATGT TGGCCAGGCT GGTCTTGAAC 900
TCCTGACCTC AACTGATCCA CCCACCCCGG CCTCCCAAAG TGTTGGGATT ACAGGCGTGA 960
GCCACCGCGC CCGGCTGTGA AAAAGGAATT TAGAACATAG TATCTGTTAA GGTTCTTACT 1020
TCCTTCAGAA ATTCCAGTTT ATCTCCAGAC AGGAAAGCTG GTAAGATCAA CCACTTAATG 1080
GTGAAAGAGC CCTGCACAGT GGCTCACGCC TGTAATCCCA GCACTCTGGG AGGCCAAGGC 1140
AGGTGGACTG CCTGAGGTCA GGAGTTCAAG ACCAGCCTCC CGTAGAGATG GTGAAACCCC 1200
ATCTCTACCA AAAATACAAA AATTAGCCAG GTGTGGTGGT GCATGTCTGT AGTCCCAGCT 1260
ACTCGGGAGG CTGAGGCAGG TGAATCACTT GAACCTGGGA GGCAGAAGTT GCAGTGAGCT 1320
GAGATCACGC CACTGTGTTC CAGCCTGGGC AACAGAGCAA GACTCCGTCT CAAACAAACA 1380
AACAAAAAAA AGTGAAAGAA ATTAAGATCT CAGCAATTTT AACTAAAAAA CCAACTCTGT 1440
GTATAAACAG CTACTACTTA AGGTATAAGG TTTTAATTTG TGTTCCCTGG GTTAAACTAA 1500
AACTAAAAAT TAAGATATAA AACGTATATA TGTAGATATA TGTGTGTGTG TATATGTACA 1560
TATATGACTT TTCTCCCCAA CAAGACAGGG TTCTCATGGA GTGCAGTGGT GTGTGATCAT 1620
GGCTCACTGC AGCCTCAACC ACTTGAGCTT AAGTGATCCT CCTGCCTCAG CCTCCTGGGC 1680
ACTGGGACTA CAGGTGTACA CCACCGCGCC ACACTGTTTT TTGTAGAGAC GGGGTCTCCC 1740
TGTGTTGCCC AGTCTGGTCT CAAATTTCTG GGCTCAAGTG ATCCTCCTGC TGCAGCCTCC 1800
CAAAGTGCTG GCATTACAGG CATGAGCCAC TACTCCAGGC TTCACAATTT TTAAAGTAAA 1860
TTATGACACA CATGAGAATA TTTACTTATC CTCAAGAATC TCAAATTGCC TTTGTCATAT 1920
TCCAATTCTG TACATATTTT TTCTTTTAAA GACAACTGTA ATTAGGAATA AAATATGTGT 1980
AATGGGAGTA AGTTAATAAA TAAAATCTGG GGCAGCTGGC TGTGATGGCT CACGCCTATA 2040
ATCCCAGCAC TTTGGGAGGC CAAGGCAGGT GGATCACCTC AAGTCAGGAG TTCAAGACCA 2100
ACTTGGCCAA CATGGTGAAA CCCCACCTCT ACTAAAAAAA TAAACAAATA AATAAATAAT 2160
AAAAAATTAG CTGGGCGTGG TGGTGGCCAC CTGTAATCCC AGCTACTTGG GAGGCTGAGA 2220
CAGGAGAATA GCTTGAACCC TGGAGGCAGA GGTTGCAGTA AGCCAAGATC GCACCATTGC 2280
ACTCCAGCCT GGGCGACAGA GTAAGACTCC GTCTCAAAAA AAAAAAAAAA AAAGAAGAAG 2340
ATTTGGTAGA GATTCAGCCG GAACATTTAT ACCTTGTATC CTAATTCCAA ACTGCTGAAG 2400
CTACAAAATA CACTGGATTA AAATAAACTA GGAAATTGGT ATCTATAACC TCAACAGAAA 2460
ACAAGGAATC TTTTTTTTTT TTTTTTTGAG ACGGAGTCTC ACTGTCACCC AGGCTGGAGT 2520
GCAATGGCAC AATCTTGGCT CACTACAACC TCCGCCTCCC GGGTTCAAAC GATTCTCCTG 2580
CCTCAGCCTC CTGAGTAGCT GGGATTACAG GTGCCCACCA CCACGCCCAG CTAACGTTTT 2640
TTTTGTATTT TTGGTAGAGA CAGGGTTTCA CCACATCGGT TAGGCTGGTC TTGAACTCCT 2700
GACCTCAGGT GATCCACCCT CCTTGGCCTC CCAAAGTGCT GGGATTACAG GCGTGAGCCA 2760
CTGTGCCCAG CCAAGAAGGA ATCGTTCTTG TCTGGAGGTT CTCTGTATAG TATAAGATCA 2820
GGATGTGTAC 2830