| Tag | Content |
|---|
EnhancerAtlas ID | HS121-01179 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:33794750-33795670 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SREBF1 | MA0595.1 | chr1:33795433-33795443 | GTGGGGTGAT | - | 6.02 | | Sox3 | MA0514.1 | chr1:33795309-33795319 | AAAACAAAGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_03931 | chr1:33794043-33801388 | Brain_Anterior_Caudate | | SE_04902 | chr1:33790379-33801411 | Brain_Cingulate_Gyrus | | SE_05882 | chr1:33788288-33801529 | Brain_Hippocampus_Middle | | SE_06849 | chr1:33792508-33796192 | Brain_Hippocampus_Middle_150 | | SE_07821 | chr1:33794002-33795568 | Brain_Inferior_Temporal_Lobe | | SE_36680 | chr1:33793746-33795167 | HMEC | | SE_40689 | chr1:33792494-33796066 | Left_Ventricle | | SE_42268 | chr1:33794219-33801089 | Lung | | SE_45933 | chr1:33792382-33815405 | Osteoblasts | | SE_53534 | chr1:33790767-33795359 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I033327 | chr1 | 33792625 | 33795456 | | GH01I033330 | chr1 | 33795637 | 33801400 |
|
Enhancer Sequence | GGAGCAGAGA GTTTTCTTCA GGATGGGGGA ACAAACCATC TCTAGCAGCA GTGATGAACA 60
AAGGAGGTAT TTCTCCTTTT TCTACTTGGC CTACTACTAC ACATCTGAGT TCCCAGATCT 120
AACAGCATCT TCCATGCTGT CCTGTCTCCT ACCCTAGGCA GAGTTAGTCC CTCTTAGTAT 180
TGTAGTGTCT ACCACACAAT ACTGCAATTA TCTTTTTCTA AACATGAGTT TTAAAGCAGG 240
GCTCTGAGTT CTAGGAGGTG ATCACAGAGC CACTTGAAAT AGCATGTAAC ATTTCTTCTG 300
TACGTACACA GCTTTGGACC ATTCTTAAGG AGGTTTAAGA CAAAAAAAAA ATAAGGCAAA 360
ATTATACATA AGGTTATAAA ACATCACACC ATGCTGTGGA GTTCCTTTAA GGCGAGACTG 420
TGTCCTTAGA GCCTAGTGCC TAACAGAGTT TCTGGCATAC AGCTGGTGCT AAAAAATATT 480
TAATGACTGA ATACCCATGT TCCTGGTAGA GACCTTCAAG AACTCTGTGC TCGCGTGTTC 540
AGGGAGGCAA AAAGGTGGCA AAACAAAGGG TGGAGGCTGC CTTCTCACCC AGCCCTCCAC 600
GTAAGGCAGG AGGTTACCTG AGCAGCCCAG GGGAGACCCC ATTTCCGTGG CCCCAGAAGC 660
CAAGGATGGA GGCAAACTGG AAGGTGGGGT GATGTTGAGG CAAGGCCACG GAAGGGGGCA 720
GGGAACCTTG TAAGCACCCA TGGGTCTAAA TGAAGGGACC TACTGGGGTG CAGAAGGCTC 780
GACTGGACAG GTCTACAAGG AATGAGAGCA CAGCAGAGTG CGCTGAAGTC GGCAGCTGGA 840
GGGGACCGTG GTGTCGAGGG CCATGGAAGG GAAGCTGTGG GGACTGTGGG GATGGAGCTT 900
CAGGCTCTGC CCGCCTCTTA 920
|
